RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PLAGL1Q9UM63 463 aa17.77■□□□□ 0.44
HDAC6-231ENST00000488905 PTRH2Q9Y3E5 179 aaKnown RBP17.77■□□□□ 0.44
HDAC6-231ENST00000488905 SLC5A10A0PJK1 596 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 CTSBP07858 339 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 TPBGLP0DKB5 382 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 PEBP1P30086 187 aaKnown RBP17.76■□□□□ 0.43
HDAC6-231ENST00000488905 DCDP81605 110 aaKnown RBP17.76■□□□□ 0.43
HDAC6-231ENST00000488905 PLOD1Q02809 727 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-231ENST00000488905 SLC9A5Q14940 896 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 NAPRTQ6XQN6 538 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 ZNF655Q8N720 491 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-231ENST00000488905 ACRBPQ8NEB7 543 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 OR2Y1Q8NGV0 311 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 FER1L6-AS2Q96M78 137 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 TMEM121Q9BTD3 319 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 AP1M1Q9BXS5 423 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 TXLNGQ9NUQ3 528 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 IFT80Q9P2H3 777 aaPredicted RBP17.76■□□□□ 0.43
HDAC6-231ENST00000488905 DHCR7Q9UBM7 475 aaKnown RBP17.76■□□□□ 0.43
HDAC6-231ENST00000488905 CDYLQ9Y232 598 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 R3HDM2Q9Y2K5 976 aaKnown RBP17.76■□□□□ 0.43
HDAC6-231ENST00000488905 MYO9AB2RTY4 2548 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 CELSR2Q9HCU4 2923 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 CACNA1DQ01668 2161 aa17.76■□□□□ 0.43
HDAC6-231ENST00000488905 CCDC162PA2VCL2 907 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 BHMG1C9JSJ3 638 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-231ENST00000488905 PSMD3O43242 534 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 KDM1AO60341 852 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 CNOT3O75175 753 aaKnown RBP17.75■□□□□ 0.43
HDAC6-231ENST00000488905 CD63P08962 238 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 OR56A5P0C7T3 313 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 ATXN8OSP0DMR3 200 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 MYBPC3Q14896 1274 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 KIR2DS3Q14952 304 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 SLC5A12Q1EHB4 618 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 CCDC38Q502W7 563 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 DCAF10Q5QP82 559 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 RAD9BQ6WBX8 426 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 PEX26Q7Z412 305 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 LINC00523Q86TU6 105 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 LURAP1LQ8IV03 231 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 IQCKQ8N0W5 287 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 GALNT16Q8N428 558 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 TAB3Q8N5C8 712 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-231ENST00000488905 UBL4BQ8N7F7 174 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 OR13J1Q8NGT2 312 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 SLC35B2Q8TB61 432 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 IRAK4Q9NWZ3 460 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 AMFRQ9UKV5 643 aa17.75■□□□□ 0.43
HDAC6-231ENST00000488905 PACSIN2Q9UNF0 486 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-231ENST00000488905 ISM1B1AKI9 464 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 PEX12O00623 359 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 OR1I1O60431 355 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 IGHEP01854 428 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 ALPPP05187 535 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 PKLRP30613 574 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 CDH17Q12864 832 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 EIF2S3LQ2VIR3 472 aaKnown RBP17.74■□□□□ 0.43
HDAC6-231ENST00000488905 NKAIN1Q4KMZ8 207 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 MRPL14Q6P1L8 145 aaKnown RBP17.74■□□□□ 0.43
HDAC6-231ENST00000488905 TLDC1Q6P9B6 456 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 AFTPHQ6ULP2 937 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 OR52K1Q8NGK4 314 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 CASS4Q9NQ75 786 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 P4HTMQ9NXG6 502 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 IMPACTQ9P2X3 320 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 B3GNT3Q9Y2A9 372 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 POLEQ07864 2286 aa17.74■□□□□ 0.43
HDAC6-231ENST00000488905 MIF4GDA9UHW6 222 aaKnown RBP17.73■□□□□ 0.43
HDAC6-231ENST00000488905 KRT86O43790 486 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 UMODP07911 640 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 MAGP20916 626 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 RAB28P51157 221 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 FOXL2P58012 376 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 PLEKHN1Q494U1 663 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-231ENST00000488905 DNAJC21Q5F1R6 531 aaKnown RBP17.73■□□□□ 0.43
HDAC6-231ENST00000488905 LYPLAL1Q5VWZ2 237 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 PPP1R32Q7Z5V6 425 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 PIAS4Q8N2W9 510 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-231ENST00000488905 DNAJC22Q8N4W6 341 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 DNAAF3Q8N9W5 541 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 SNRNP40Q96DI7 357 aaKnown RBP17.73■□□□□ 0.43
HDAC6-231ENST00000488905 C19orf60Q96EN9 201 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 NDC1Q9BTX1 674 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 PLCL2Q9UPR0 1127 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 SVILO95425 2214 aa17.73■□□□□ 0.43
HDAC6-231ENST00000488905 DIDO1Q9BTC0 2240 aaKnown RBP17.73■□□□□ 0.43
HDAC6-231ENST00000488905 TCRBV7S2A1N4TA0A589 114 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 A1L4Q6 167 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 HEATR9A2RTY3 570 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 ERI2A8K979 691 aaKnown RBP17.72■□□□□ 0.43
HDAC6-231ENST00000488905 F8W8V4 182 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 KLHL41O60662 606 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 DDAH2O95865 285 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 FTCDO95954 541 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 GOT2P00505 430 aaKnown RBP17.72■□□□□ 0.43
HDAC6-231ENST00000488905 GCGRP47871 477 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 ZNF75DP51815 510 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 CSE1LP55060 971 aaKnown RBP17.72■□□□□ 0.43
HDAC6-231ENST00000488905 NR6A1Q15406 480 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms