RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 AGPAT4Q9NRZ5 378 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 IGSF5Q9NSI5 407 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 NLE1Q9NVX2 485 aaPredicted RBP13.02□□□□□ -0.33
CHD1L-208ENST00000488864 MARCH4Q9P2E8 410 aaPredicted RBP13.02□□□□□ -0.33
CHD1L-208ENST00000488864 MAP10Q9P2G4 905 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 WNT16Q9UBV4 365 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 ZNF232Q9UNY5 417 aa13.02□□□□□ -0.33
CHD1L-208ENST00000488864 RNF103-CHMP3A0A140T963 221 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 TSPAN11A1L157 253 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 FAM170BA6NMN3 283 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 C9JVG2 144 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 UBFD1O14562 309 aaKnown RBP13.01□□□□□ -0.33
CHD1L-208ENST00000488864 ACOX3O15254 700 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 SPINT1O43278 529 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 RXRGP48443 463 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 ATP6AP1Q15904 470 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 NEPROQ6NW34 567 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 FAM151BQ6UXP7 276 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.01□□□□□ -0.33
CHD1L-208ENST00000488864 ERN2Q76MJ5 926 aaKnown RBP13.01□□□□□ -0.33
CHD1L-208ENST00000488864 TRMT11Q7Z4G4 463 aaKnown RBP13.01□□□□□ -0.33
CHD1L-208ENST00000488864 PACRGLQ8N7B6 248 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 DDHD1Q8NEL9 900 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 GANCQ8TET4 914 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 SLC35B4Q969S0 331 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 LYSMD1Q96S90 227 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 OAZ3Q9UMX2 235 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 TTC28Q96AY4 2481 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 WDFY4Q6ZS81 3184 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 A0A1W2PQ67 120 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 DHRS12A0PJE2 317 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 A8MT66 165 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 C1SP09871 688 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 ZNF182P17025 639 aaPredicted RBP13.01□□□□□ -0.33
CHD1L-208ENST00000488864 BPIP17213 487 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 POLR2IP36954 125 aaKnown RBP13.01□□□□□ -0.33
CHD1L-208ENST00000488864 SLC1A2P43004 574 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 BCAP31P51572 246 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 RPS14P62263 151 aaKnown RBP13.01□□□□□ -0.33
CHD1L-208ENST00000488864 GAS6Q14393 721 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 NEDD8Q15843 81 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 MAP7D1Q3KQU3 841 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 TMEM31Q5JXX7 168 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 FAM46CQ5VWP2 391 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 HDDC3Q8N4P3 179 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 ZNF420Q8TAQ5 688 aaPredicted RBP13.01□□□□□ -0.33
CHD1L-208ENST00000488864 ZUFSPQ96AP4 578 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 PHF21BQ96EK2 531 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 C3orf30Q96M34 536 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 NEURL2Q9BR09 285 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 LTB4R2Q9NPC1 389 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 NSMCE4AQ9NXX6 385 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 GIMAP2Q9UG22 337 aa13.01□□□□□ -0.33
CHD1L-208ENST00000488864 TCRBV21S2A2A0A5A6 115 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 PRR23AA6NEV1 266 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 CLOCKO15516 846 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 ALDOCP09972 364 aaKnown RBP13□□□□□ -0.33
CHD1L-208ENST00000488864 ZNF12P17014 697 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 VIPR1P32241 457 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 MC4RP32245 332 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 MMP12P39900 470 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 ETV3P41162 512 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 ACVR1Q04771 509 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 CAPRIN1Q14444 709 aaKnown RBP13□□□□□ -0.33
CHD1L-208ENST00000488864 SEMA3AQ14563 771 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 CRY1Q16526 586 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 ZNF789Q5FWF6 425 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 TECRLQ5HYJ1 363 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 RBM20Q5T481 1227 aaKnown RBP13□□□□□ -0.33
CHD1L-208ENST00000488864 IRAK1BP1Q5VVH5 260 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 ZNF776Q68DI1 518 aaPredicted RBP13□□□□□ -0.33
CHD1L-208ENST00000488864 ERAP2Q6P179 960 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 C16orf87Q6PH81 154 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 HACD2Q6Y1H2 254 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 Q6ZVL8 140 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 HSD11B1LQ7Z5J1 315 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 ZC3H7AQ8IWR0 971 aaKnown RBP13□□□□□ -0.33
CHD1L-208ENST00000488864 ZNF687Q8N1G0 1237 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 SLC15A4Q8N697 577 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 GPR26Q8NDV2 337 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 OR4L1Q8NH43 312 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 SLC45A3Q96JT2 553 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 GPATCH1Q9BRR8 931 aaKnown RBP13□□□□□ -0.33
CHD1L-208ENST00000488864 ABCG8Q9H221 673 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 MMP17Q9ULZ9 603 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 WDR37Q9Y2I8 494 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 FADS3Q9Y5Q0 445 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 EI24O14681 340 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 ELFN1P0C7U0 828 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 CYP2A6P11509 494 aaPredicted RBP13□□□□□ -0.33
CHD1L-208ENST00000488864 MATN1P21941 496 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 GPX3P22352 226 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 CCT8P50990 548 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 FZD5Q13467 585 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 PLCL1Q15111 1095 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 ZRANB3Q5FWF4 1079 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 EOGTQ5NDL2 527 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 PIP5KL1Q5T9C9 394 aa13□□□□□ -0.33
CHD1L-208ENST00000488864 KIAA1324Q6UXG2 1013 aaKnown RBP13□□□□□ -0.33
CHD1L-208ENST00000488864 LARP4Q71RC2 724 aaKnown RBP eCLIP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms