RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ELK3P41970 407 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 ARL4DP49703 201 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 RAB28P51157 221 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 MPP1Q00013 466 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 TIAL1Q01085 375 aaKnown RBP eCLIP15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 ABHD18Q0P651 414 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 GPR19Q15760 415 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 ZIC1Q15915 447 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 CCSMST1Q4G0I0 132 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 ACSBG2Q5FVE4 666 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 SPANXN3Q5MJ09 141 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 HP1BP3Q5SSJ5 553 aaPredicted RBP15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 KIAA1614Q5VZ46 1190 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 TRIM73Q86UV7 250 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 KCNMB4Q86W47 210 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 RASGRP3Q8IV61 690 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 CNTN4Q8IWV2 1026 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 PDIK1LQ8N165 341 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 ZBTB2Q8N680 514 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 ESX1Q8N693 406 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 LMNTD1Q8N9Z9 388 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 C2CD4AQ8NCU7 369 aaPredicted RBP15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 GIMAP7Q8NHV1 300 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 CALML6Q8TD86 181 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 SNF8Q96H20 258 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 IL17FQ96PD4 163 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 UBL7Q96S82 380 aaPredicted RBP15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 SLC12A9Q9BXP2 914 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 IARS2Q9NSE4 1012 aaKnown RBP15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 KLHL42Q9P2K6 505 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 CIDEBQ9UHD4 219 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 SNX24Q9Y343 169 aa15.42■□□□□ 0.06
CTDSP1-209ENST00000488627 E7ESA3 106 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 TERTO14746 1132 aaKnown RBP15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 PRICKLE3O43900 615 aaPredicted RBP15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 RPN2P04844 631 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 CD9P21926 228 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 F8A1P23610 371 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 STAT5AP42229 794 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 RHDQ02161 417 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 KIR2DS3Q14952 304 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 TMTC4Q5T4D3 741 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 STEAP4Q687X5 459 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 CYB5D1Q6P9G0 228 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 C6orf15Q6UXA7 325 aaPredicted RBP15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 ZNF572Q7Z3I7 529 aaPredicted RBP15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 GALNT6Q8NCL4 622 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 OR8K5Q8NH50 307 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 KCNJ9Q92806 393 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 LRRC39Q96DD0 335 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 ERP44Q9BS26 406 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 FAM167BQ9BTA0 163 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 CHRNA10Q9GZZ6 450 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 KLHL25Q9H0H3 589 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 AKIRIN1Q9H9L7 192 aaPredicted RBP15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 FAM60AQ9NP50 221 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 SOHLH2Q9NX45 425 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 DHRS7Q9Y394 339 aa15.41■□□□□ 0.06
CTDSP1-209ENST00000488627 KRT87PA6NCN2 255 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 FAM187AA6NFU0 413 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 RASGRF2O14827 1237 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 ATXN7O15265 892 aaPredicted RBP15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 RAD51CO43502 376 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 KDM1AO60341 852 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 BDKRB1P46663 353 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 GABRA4P48169 554 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 ARL4CP56559 192 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 C2orf54Q08AI8 447 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 HIF1AQ16665 826 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 SLC5A12Q1EHB4 618 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 KLHL38Q2WGJ6 581 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 TEDDM1Q5T9Z0 273 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 PRAMEF17Q5VTA0 474 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 DUPD1Q68J44 220 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 TRMT10BQ6PF06 316 aaKnown RBP15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 CYHR1Q6ZMK1 362 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 CDHR3Q6ZTQ4 885 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 FAM20CQ8IXL6 584 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 C2orf73Q8N5S3 287 aaPredicted RBP15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 SLC38A9Q8NBW4 561 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 OR2L8Q8NGY9 312 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 GSDMBQ8TAX9 411 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 DENND1AQ8TEH3 1009 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 RAD51AP1Q96B01 352 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 CERS2Q96G23 380 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 SLC45A3Q96JT2 553 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 AARSD1Q9BTE6 412 aaKnown RBP15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 SYTL2Q9HCH5 934 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 ZC3H7BQ9UGR2 993 aaKnown RBP15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 IL17BQ9UHF5 180 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 LNPEPQ9UIQ6 1025 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 CHMP2BQ9UQN3 213 aa15.4■□□□□ 0.06
CTDSP1-209ENST00000488627 IGSF10Q6WRI0 2623 aa15.39■□□□□ 0.05
CTDSP1-209ENST00000488627 E5RI56 91 aa15.39■□□□□ 0.05
CTDSP1-209ENST00000488627 H3BMH7 237 aa15.39■□□□□ 0.05
CTDSP1-209ENST00000488627 ERVH48-1M5A8F1 160 aa15.39■□□□□ 0.05
CTDSP1-209ENST00000488627 HCRTR1O43613 425 aa15.39■□□□□ 0.05
CTDSP1-209ENST00000488627 PSIP1O75475 530 aaKnown RBP15.39■□□□□ 0.05
CTDSP1-209ENST00000488627 AHSGP02765 367 aa15.39■□□□□ 0.05
CTDSP1-209ENST00000488627 NTRK1P04629 796 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms