RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 ZBTB20Q9HC78 741 aaPredicted RBP18.35■□□□□ 0.53
GGPS1-206ENST00000488594 SPHK1Q9NYA1 384 aa18.35■□□□□ 0.53
GGPS1-206ENST00000488594 EFR3BQ9Y2G0 817 aa18.35■□□□□ 0.53
GGPS1-206ENST00000488594 KCNN4O15554 427 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 FTH1P02794 183 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 PIM1P11309 404 aaPredicted RBP18.34■□□□□ 0.53
GGPS1-206ENST00000488594 CTNNA2P26232 953 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 NSG1P42857 185 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 MARCKSL1P49006 195 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 ARSFP54793 590 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 KIR2DS3Q14952 304 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 SLC5A12Q1EHB4 618 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 AGAP7PQ5VUJ5 663 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 C11orf63Q6NUN7 778 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 IGFL2Q6UWQ7 119 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 KCNMB4Q86W47 210 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 OR5K2Q8NHB8 316 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 ACTL9Q8TC94 416 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 AGAP4Q96P64 663 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 WDR54Q9H977 334 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 NLE1Q9NVX2 485 aaPredicted RBP18.34■□□□□ 0.53
GGPS1-206ENST00000488594 FBXL4Q9UKA2 621 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 NOVA2Q9UNW9 492 aaKnown RBP18.34■□□□□ 0.53
GGPS1-206ENST00000488594 CELSR2Q9HCU4 2923 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 ABCA12Q86UK0 2595 aa18.34■□□□□ 0.53
GGPS1-206ENST00000488594 MACROD2A1Z1Q3 448 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 AP2A1O95782 977 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 ALBP02768 609 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 ATXN8OSP0DMR3 200 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 RBP3P10745 1247 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 TSFMP43897 325 aaKnown RBP18.33■□□□□ 0.53
GGPS1-206ENST00000488594 EIF3EP60228 445 aaKnown RBP18.33■□□□□ 0.53
GGPS1-206ENST00000488594 OTUD4Q01804 1114 aaKnown RBP18.33■□□□□ 0.53
GGPS1-206ENST00000488594 ITIH4Q14624 930 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 DBN1Q16643 649 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 B3GNTL1Q67FW5 361 aaPredicted RBP18.33■□□□□ 0.53
GGPS1-206ENST00000488594 CNGA4Q8IV77 575 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 VSTM4Q8IW00 320 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 KLHDC8BQ8IXV7 354 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 CCDC110Q8TBZ0 833 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 MRM3Q9HC36 420 aaKnown RBP18.33■□□□□ 0.53
GGPS1-206ENST00000488594 EURLQ9NYK6 297 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 SMARCAL1Q9NZC9 954 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 CDC23Q9UJX2 597 aa18.33■□□□□ 0.53
GGPS1-206ENST00000488594 TDRKHQ9Y2W6 561 aaKnown RBP18.33■□□□□ 0.53
GGPS1-206ENST00000488594 A0A1B0GX78 115 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 ISM1B1AKI9 464 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 MASP2O00187 686 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 LRRTM2O43300 516 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 HNRNPRO43390 633 aaKnown RBP18.32■□□□□ 0.52
GGPS1-206ENST00000488594 ONECUT2O95948 504 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 CTSBP07858 339 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 EDN3P14138 238 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 ALAS2P22557 587 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 HIF1AQ16665 826 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 DARS2Q6PI48 645 aaKnown RBP18.32■□□□□ 0.52
GGPS1-206ENST00000488594 PACS1Q6VY07 963 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 OVCH1Q7RTY7 1134 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 STYXQ8WUJ0 223 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 ELMO1Q92556 727 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 KRT35Q92764 455 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 CDKN2AIPNLQ96HQ2 116 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 VPS50Q96JG6 964 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 SLC6A20Q9NP91 592 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 SLC22A11Q9NSA0 550 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 NXT1Q9UKK6 140 aaKnown RBP18.32■□□□□ 0.52
GGPS1-206ENST00000488594 ENTPD4Q9Y227 616 aa18.32■□□□□ 0.52
GGPS1-206ENST00000488594 CCDC78A2IDD5 438 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 PJA2O43164 708 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 TPBGLP0DKB5 382 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 MAGEA1P43355 309 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 GCGRP47871 477 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 FOXL2P58012 376 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 SPARCL1Q14515 664 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 ZNF169Q14929 603 aaPredicted RBP18.31■□□□□ 0.52
GGPS1-206ENST00000488594 TLR1Q15399 786 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 SYTL3Q4VX76 610 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 PIANPQ8IYJ0 282 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 DNAJB14Q8TBM8 379 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 GRHL3Q8TE85 626 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 FAR1Q8WVX9 515 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 ALS2CR12Q96Q35 445 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 SLC26A1Q9H2B4 701 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 EPS8L2Q9H6S3 715 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 CSAG2Q9Y5P2 127 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 FER1L5A0AVI2 2057 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 CRYBG3Q68DQ2 2970 aa18.31■□□□□ 0.52
GGPS1-206ENST00000488594 SLC5A10A0PJK1 596 aa18.3■□□□□ 0.52
GGPS1-206ENST00000488594 BHMG1C9JSJ3 638 aaPredicted RBP18.3■□□□□ 0.52
GGPS1-206ENST00000488594 F8W8V4 182 aa18.3■□□□□ 0.52
GGPS1-206ENST00000488594 E2F3O00716 465 aa18.3■□□□□ 0.52
GGPS1-206ENST00000488594 PRSS56P0CW18 603 aa18.3■□□□□ 0.52
GGPS1-206ENST00000488594 ELAVL4P26378 380 aaKnown RBP18.3■□□□□ 0.52
GGPS1-206ENST00000488594 PTPN7P35236 360 aa18.3■□□□□ 0.52
GGPS1-206ENST00000488594 CDC16Q13042 620 aa18.3■□□□□ 0.52
GGPS1-206ENST00000488594 NAA30Q147X3 362 aaPredicted RBP18.3■□□□□ 0.52
GGPS1-206ENST00000488594 ZRSR2Q15696 482 aaKnown RBP18.3■□□□□ 0.52
GGPS1-206ENST00000488594 DNAJC21Q5F1R6 531 aaKnown RBP18.3■□□□□ 0.52
GGPS1-206ENST00000488594 YOD1Q5VVQ6 348 aaPredicted RBP18.3■□□□□ 0.52
GGPS1-206ENST00000488594 FCRL6Q6DN72 434 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms