RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 BIRC8Q96P09 236 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 IL17FQ96PD4 163 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 DDX47Q9H0S4 455 aaKnown RBP17.15■□□□□ 0.34
ITGB1-215ENST00000488494 ACTL8Q9H568 366 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 AKIRIN1Q9H9L7 192 aaPredicted RBP17.15■□□□□ 0.34
ITGB1-215ENST00000488494 ASIC3Q9UHC3 531 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 PCDHB3Q9Y5E6 796 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 PCDHGA6Q9Y5G7 932 aa17.15■□□□□ 0.34
ITGB1-215ENST00000488494 ISM1B1AKI9 464 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 KPNA5O15131 536 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 ESR1P03372 595 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 F7P08709 466 aaPredicted RBP17.14■□□□□ 0.33
ITGB1-215ENST00000488494 PLA2G2AP14555 144 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 TCP1P17987 556 aaKnown RBP17.14■□□□□ 0.33
ITGB1-215ENST00000488494 BDKRB1P46663 353 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 KCNAB2Q13303 367 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 ERV3-1Q14264 604 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 KIR2DS3Q14952 304 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 ZIC1Q15915 447 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 KYNUQ16719 465 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 ANKRD20A4Q4UJ75 823 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 CRTC2Q53ET0 693 aaPredicted RBP17.14■□□□□ 0.33
ITGB1-215ENST00000488494 NEPROQ6NW34 567 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 CNSTQ6PJW8 725 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 ZNF605Q86T29 641 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 CILP2Q8IUL8 1156 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 PPIL6Q8IXY8 311 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 NAT8LQ8N9F0 302 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 LMNTD1Q8N9Z9 388 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 LINC01555Q8NAE3 123 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 SLC38A9Q8NBW4 561 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 MR1Q95460 341 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 CAPZA3Q96KX2 299 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 TCF12Q99081 682 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 MENTQ9BUN1 341 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 TWSG1Q9GZX9 223 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 SYTL2Q9HCH5 934 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 GEMIN8Q9NWZ8 242 aaKnown RBP17.14■□□□□ 0.33
ITGB1-215ENST00000488494 CRYL1Q9Y2S2 319 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 NFS1Q9Y697 457 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 MAD1L1Q9Y6D9 718 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 COL6A6A6NMZ7 2263 aa17.14■□□□□ 0.33
ITGB1-215ENST00000488494 ZCWPW2A0A1B0GU75 182 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 KRT87PA6NCN2 255 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 H3BMM5 538 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 CREG1O75629 220 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 ITGA1P56199 1179 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 GNG11P61952 73 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 RPS18P62269 152 aaKnown RBP17.13■□□□□ 0.33
ITGB1-215ENST00000488494 GRB7Q14451 532 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 SLC5A12Q1EHB4 618 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 PLEKHS1Q5SXH7 462 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 RNASEH2BQ5TBB1 312 aaKnown RBP17.13■□□□□ 0.33
ITGB1-215ENST00000488494 CENPUQ71F23 418 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 TMEM135Q86UB9 458 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 FAM20CQ8IXL6 584 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 C2orf73Q8N5S3 287 aaPredicted RBP17.13■□□□□ 0.33
ITGB1-215ENST00000488494 N4BP2L2Q92802 583 aaPredicted RBP17.13■□□□□ 0.33
ITGB1-215ENST00000488494 CLIP3Q96DZ5 547 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 TCTN2Q96GX1 697 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 ADNPQ9H2P0 1102 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 ACTR5Q9H9F9 607 aaPredicted RBP17.13■□□□□ 0.33
ITGB1-215ENST00000488494 FAM60AQ9NP50 221 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 STARD5Q9NSY2 213 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 PYCARDQ9ULZ3 195 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 VPS9D1Q9Y2B5 631 aa17.13■□□□□ 0.33
ITGB1-215ENST00000488494 CDC14CA4D256 554 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 B8ZZF3 427 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 E7EQ34 232 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 RASGRF2O14827 1237 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 FURINP09958 794 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 SFTPCP11686 197 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 CD9P21926 228 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 RORAP35398 523 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 SLC1A2P43004 574 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 ADARP55265 1226 aaKnown RBP17.12■□□□□ 0.33
ITGB1-215ENST00000488494 THOC5Q13769 683 aaKnown RBP17.12■□□□□ 0.33
ITGB1-215ENST00000488494 PTK6Q13882 451 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 PRICKLE2Q7Z3G6 844 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 DENND6AQ8IWF6 608 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 DSELQ8IZU8 1212 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 ZBTB2Q8N680 514 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 OR2L8Q8NGY9 312 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 APOBEC4Q8WW27 367 aaKnown RBP17.12■□□□□ 0.33
ITGB1-215ENST00000488494 LRFN5Q96NI6 719 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 RAB11FIP5Q9BXF6 653 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 CHST8Q9H2A9 424 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 PCMTD2Q9NV79 361 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 INTS10Q9NVR2 710 aaKnown RBP17.12■□□□□ 0.33
ITGB1-215ENST00000488494 SERTAD3Q9UJW9 196 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 SLC39A10Q9ULF5 831 aa17.12■□□□□ 0.33
ITGB1-215ENST00000488494 MAGEB16A2A368 324 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 CTAGE9A4FU28 777 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 E5RI56 91 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 MEN1O00255 615 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 HCRTR1O43613 425 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 USP1O94782 785 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 C1orf105O95561 183 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 KLK3P07288 261 aaPredicted RBP17.11■□□□□ 0.33
ITGB1-215ENST00000488494 CHRM3P20309 590 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms