RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 PPP1R3BQ86XI6 285 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 DCUN1D3Q8IWE4 304 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 CNTN4Q8IWV2 1026 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 LMNTD2Q8IXW0 634 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 LMNTD1Q8N9Z9 388 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL9A2-208ENST00000488463 SPATA4Q8NEY3 305 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 FAM136AQ96C01 138 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 ELMO2Q96JJ3 720 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 FCRL4Q96PJ5 515 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 UBL7Q96S82 380 aaPredicted RBP13.74□□□□□ -0.21
COL9A2-208ENST00000488463 TUBB2BQ9BVA1 445 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 SLC12A9Q9BXP2 914 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 ULBP3Q9BZM4 244 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 C20orf96Q9NUD7 363 aaPredicted RBP13.74□□□□□ -0.21
COL9A2-208ENST00000488463 CIDEBQ9UHD4 219 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 FBXO5Q9UKT4 447 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 TDRKHQ9Y2W6 561 aaKnown RBP13.74□□□□□ -0.21
COL9A2-208ENST00000488463 TEX264Q9Y6I9 313 aa13.74□□□□□ -0.21
COL9A2-208ENST00000488463 TENM4Q6N022 2769 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 PIPSLA2A3N6 862 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 E7ESA3 106 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 HCRTR1O43613 425 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 KIAA0754O94854 1291 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 HAUS5O94927 633 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 TTC4O95801 387 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 CDH3P22223 829 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 ATP1A2P50993 1020 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 RAB28P51157 221 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 MPP1Q00013 466 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 ACY1Q03154 408 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 THOC5Q13769 683 aaKnown RBP13.73□□□□□ -0.21
COL9A2-208ENST00000488463 BBS9Q3SYG4 887 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 ACSBG2Q5FVE4 666 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 STEAP4Q687X5 459 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 CNSTQ6PJW8 725 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 SYT10Q6XYQ8 523 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 ZNF572Q7Z3I7 529 aaPredicted RBP13.73□□□□□ -0.21
COL9A2-208ENST00000488463 TRIM73Q86UV7 250 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 KCNMB4Q86W47 210 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 BPHLQ86WA6 291 aaPredicted RBP13.73□□□□□ -0.21
COL9A2-208ENST00000488463 IL22RA1Q8N6P7 574 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 SLC38A9Q8NBW4 561 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 GALNT6Q8NCL4 622 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 C2CD4AQ8NCU7 369 aaPredicted RBP13.73□□□□□ -0.21
COL9A2-208ENST00000488463 CFAP61Q8NHU2 1237 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 DENND1AQ8TEH3 1009 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 IL17FQ96PD4 163 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 CHRNA10Q9GZZ6 450 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 AKIRIN1Q9H9L7 192 aaPredicted RBP13.73□□□□□ -0.21
COL9A2-208ENST00000488463 FAM60AQ9NP50 221 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 PDE7BQ9NP56 450 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 KLHL42Q9P2K6 505 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 IL17BQ9UHF5 180 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 RARRES3Q9UL19 164 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 VPS9D1Q9Y2B5 631 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 PCM1Q15154 2024 aa13.73□□□□□ -0.21
COL9A2-208ENST00000488463 SPENQ96T58 3664 aaKnown RBP13.72□□□□□ -0.21
COL9A2-208ENST00000488463 HEATR5BQ9P2D3 2071 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 ERVH48-1M5A8F1 160 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 SMAPO00193 183 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 PFDN6O15212 129 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 ATXN7O15265 892 aaPredicted RBP13.72□□□□□ -0.21
COL9A2-208ENST00000488463 ERVK-10P10266 1014 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 CD9P21926 228 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 CASQ1P31415 396 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 ELK3P41970 407 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 CYP4F2P78329 520 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 RHDQ02161 417 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 KIR2DS3Q14952 304 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 SLC5A12Q1EHB4 618 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.72□□□□□ -0.21
COL9A2-208ENST00000488463 SPANXN3Q5MJ09 141 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 PRAMEF17Q5VTA0 474 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 TRMT10BQ6PF06 316 aaKnown RBP13.72□□□□□ -0.21
COL9A2-208ENST00000488463 ZNF517Q6ZMY9 492 aaPredicted RBP13.72□□□□□ -0.21
COL9A2-208ENST00000488463 CDHR3Q6ZTQ4 885 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 PDIK1LQ8N165 341 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 ZBTB2Q8N680 514 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 ESX1Q8N693 406 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 OR2L8Q8NGY9 312 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 OR1L3Q8NH93 324 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 HMGCLL1Q8TB92 370 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 KCNJ9Q92806 393 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 SNF8Q96H20 258 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 SLC45A3Q96JT2 553 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 NAT9Q9BTE0 207 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 KLHL25Q9H0H3 589 aa13.72□□□□□ -0.21
COL9A2-208ENST00000488463 IARS2Q9NSE4 1012 aaKnown RBP13.72□□□□□ -0.21
COL9A2-208ENST00000488463 EFCAB8A8MWE9 144 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 RASGRF2O14827 1237 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 RAD51CO43502 376 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 PSIP1O75475 530 aaKnown RBP13.71□□□□□ -0.21
COL9A2-208ENST00000488463 RPN2P04844 631 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 ERGP11308 486 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 CHRM3P20309 590 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 BDKRB1P46663 353 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 FRG1Q14331 258 aaKnown RBP13.71□□□□□ -0.21
COL9A2-208ENST00000488463 FASTKD3Q14CZ7 662 aaKnown RBP13.71□□□□□ -0.21
COL9A2-208ENST00000488463 HIF1AQ16665 826 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms