RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 ECM29Q5VYK3 1845 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 SHANK3Q9BYB0 1731 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 GRXCR1A8MXD5 290 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 SAP18O00422 153 aaKnown RBP13.23□□□□□ -0.29
PKD1-219ENST00000486339 SLC22A2O15244 555 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 CCNYL3P0C7X3 344 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 SLC6A4P31645 630 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 RPS21P63220 83 aaKnown RBP13.23□□□□□ -0.29
PKD1-219ENST00000486339 ISLR2Q6UXK2 745 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 TMEM173Q86WV6 379 aaPredicted RBP13.23□□□□□ -0.29
PKD1-219ENST00000486339 NAT14Q8WUY8 206 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 RORBQ92753 470 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 TCEAL4Q96EI5 215 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 CNOT6Q9ULM6 557 aaKnown RBP13.23□□□□□ -0.29
PKD1-219ENST00000486339 SH3GLB1Q9Y371 365 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 PIAS3Q9Y6X2 628 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.23□□□□□ -0.29
PKD1-219ENST00000486339 FAM234BA2RU67 622 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 MAGEB17A8MXT2 336 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 H3BNH8 94 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 STX16-NPEPL1H3BU86 382 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 STX16O14662 325 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 CEBPBP17676 345 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 ADAM17P78536 824 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 TOMM20Q15388 145 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 NEDD8Q15843 81 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 AMZ1Q400G9 498 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 ACSBG2Q5FVE4 666 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 MPP7Q5T2T1 576 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 RPS27LQ71UM5 84 aaKnown RBP13.23□□□□□ -0.29
PKD1-219ENST00000486339 ANKRD33Q7Z3H0 272 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 TXNDC5Q8NBS9 432 aaKnown RBP13.23□□□□□ -0.29
PKD1-219ENST00000486339 KCNN1Q92952 543 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 SLC47A1Q96FL8 570 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 DUSP26Q9BV47 211 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 ZNF229Q9UJW7 825 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 ACTL7AQ9Y615 435 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 U3KQV3 271 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 DRGXA6NNA5 263 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 WASH4PA8MWX3 477 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 RGS5O15539 181 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 DNAJA2O60884 412 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 NTSR1P30989 418 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 CDC42P60953 191 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 GCNT6Q5T4J0 391 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 GOLGA7Q7Z5G4 137 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 NUDT13Q86X67 352 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 ARHGAP12Q8IWW6 846 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 FAM20CQ8IXL6 584 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 CHST14Q8NCH0 376 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 OR10A6Q8NH74 314 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 SCRN2Q96FV2 425 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 SLC29A3Q9BZD2 475 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 MUC13Q9H3R2 512 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 SIRPGQ9P1W8 387 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 GMPPBQ9Y5P6 360 aa13.23□□□□□ -0.29
PKD1-219ENST00000486339 SSC5DA1L4H1 1573 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 A0A087WXM4 84 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 H3BQ06 376 aaPredicted RBP13.22□□□□□ -0.29
PKD1-219ENST00000486339 OAS1P00973 400 aaKnown RBP13.22□□□□□ -0.29
PKD1-219ENST00000486339 MYL12AP19105 171 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 PRPS1L1P21108 318 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 CPN2P22792 545 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 ALDH4A1P30038 563 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 SP140Q13342 867 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 MBOAT1Q6ZNC8 495 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 SAMD14Q8IZD0 417 aaPredicted RBP13.22□□□□□ -0.29
PKD1-219ENST00000486339 COL4A1P02462 1669 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 A0A1W2PQU0 124 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 HIDE1A8MVS5 230 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 PRR5P85299 388 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.22□□□□□ -0.29
PKD1-219ENST00000486339 SLC9A5Q14940 896 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 NAIF1Q69YI7 327 aaPredicted RBP13.22□□□□□ -0.29
PKD1-219ENST00000486339 HTR3DQ70Z44 454 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 RTL10Q7L3V2 364 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 ARMCX6Q7L4S7 300 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 VN1R5Q7Z5H4 357 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 OR52L1Q8NGH7 329 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 FGF13Q92913 245 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 ZBED6CLQ96FA7 236 aaPredicted RBP13.22□□□□□ -0.29
PKD1-219ENST00000486339 KLHDC7BQ96G42 594 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 CADM1Q9BY67 442 aaKnown RBP13.22□□□□□ -0.29
PKD1-219ENST00000486339 DENND2DQ9H6A0 471 aaPredicted RBP13.22□□□□□ -0.29
PKD1-219ENST00000486339 SLC2A4RGQ9NR83 387 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 GPN3Q9UHW5 284 aaPredicted RBP13.22□□□□□ -0.29
PKD1-219ENST00000486339 ARRB1P49407 418 aaPredicted RBP13.22□□□□□ -0.29
PKD1-219ENST00000486339 NEK2P51955 445 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 SLC7A9P82251 487 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 CYP4F3Q08477 520 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 MPP2Q14168 576 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 ZNF544Q6NX49 715 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 CDHR3Q6ZTQ4 885 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 CPXM2Q8N436 756 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 TERB1Q8NA31 727 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 TTC29Q8NA56 475 aaPredicted RBP13.22□□□□□ -0.29
PKD1-219ENST00000486339 OR9A1PQ8NGU1 263 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 GRIP2Q9C0E4 1043 aa13.22□□□□□ -0.29
PKD1-219ENST00000486339 RSPH9Q9H1X1 276 aaPredicted RBP13.22□□□□□ -0.29
PKD1-219ENST00000486339 LYVE1Q9Y5Y7 322 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms