RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 POP7O75817 140 aaKnown RBP7.9□□□□□ -1.14
XRN1-212ENST00000486211 ATE1O95260 518 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 ALBP02768 609 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 TPOP07202 933 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 ABOP16442 354 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 CHRNB2P17787 502 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 RPL7AP62424 266 aaKnown RBP7.9□□□□□ -1.14
XRN1-212ENST00000486211 HSF1Q00613 529 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 OGDHQ02218 1023 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 DSC2Q02487 901 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 PRKAA1Q13131 559 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 XRCC4Q13426 336 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 OLIG2Q13516 323 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 RBBP7Q16576 425 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 MARC1Q5VT66 337 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 METRNLQ641Q3 311 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 KLHL10Q6JEL2 608 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 HIBCHQ6NVY1 386 aaPredicted RBP7.9□□□□□ -1.14
XRN1-212ENST00000486211 SHISA6Q6ZSJ9 500 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 CYP4V2Q6ZWL3 525 aaPredicted RBP7.9□□□□□ -1.14
XRN1-212ENST00000486211 KBTBD2Q8IY47 623 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 CIARTQ8N365 385 aaPredicted RBP7.9□□□□□ -1.14
XRN1-212ENST00000486211 BBS5Q8N3I7 341 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 ACRBPQ8NEB7 543 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 CCHCR1Q8TD31 782 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 SLC20A1Q8WUM9 679 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 HDAC10Q969S8 669 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 C12orf66Q96MD2 445 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 PEBP4Q96S96 227 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 EIF3CQ99613 913 aaKnown RBP7.9□□□□□ -1.14
XRN1-212ENST00000486211 CNPY3Q9BT09 278 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 NAA15Q9BXJ9 866 aaKnown RBP7.9□□□□□ -1.14
XRN1-212ENST00000486211 WWP1Q9H0M0 922 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 DHX35Q9H5Z1 703 aaKnown RBP7.9□□□□□ -1.14
XRN1-212ENST00000486211 SOX17Q9H6I2 414 aaPredicted RBP7.9□□□□□ -1.14
XRN1-212ENST00000486211 SAMSN1Q9NSI8 373 aaKnown RBP7.9□□□□□ -1.14
XRN1-212ENST00000486211 TXLNGQ9NUQ3 528 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 IL17CQ9P0M4 197 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 RNF6Q9Y252 685 aa7.9□□□□□ -1.14
XRN1-212ENST00000486211 ASPDHA6ND91 283 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 OR5H15A6NDH6 313 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 VSTM2BA6NLU5 285 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 NPIPA5E9PKD4 350 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 FAM227AF5H4B4 570 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 DAPK3O43293 454 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 TSPAN12O95859 305 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 CELA2AP08217 269 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 COX6A1P12074 109 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 FDXRP22570 491 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 CHRNB4P30926 498 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 DLX5P56178 289 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 FMO1Q01740 532 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 TMEM115Q12893 351 aaPredicted RBP7.89□□□□□ -1.15
XRN1-212ENST00000486211 STIM1Q13586 685 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 PKP1Q13835 747 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 SLC5A12Q1EHB4 618 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 VWA3BQ502W6 1294 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 ATG9BQ674R7 924 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 ISM2Q6H9L7 571 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 TLDC1Q6P9B6 456 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 NAPRTQ6XQN6 538 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 CEP128Q6ZU80 1094 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 SYT9Q86SS6 491 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 CDC20BQ86Y33 519 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 TAB3Q8N5C8 712 aaPredicted RBP7.89□□□□□ -1.15
XRN1-212ENST00000486211 CPSF7Q8N684 471 aaKnown RBP7.89□□□□□ -1.15
XRN1-212ENST00000486211 RASGEF1AQ8N9B8 481 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 C19orf47Q8N9M1 422 aaKnown RBP7.89□□□□□ -1.15
XRN1-212ENST00000486211 ARRDC2Q8TBH0 407 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 CCDC110Q8TBZ0 833 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.89□□□□□ -1.15
XRN1-212ENST00000486211 ASB5Q8WWX0 329 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 CALR3Q96L12 384 aaKnown RBP7.89□□□□□ -1.15
XRN1-212ENST00000486211 VPS35Q96QK1 796 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 SNRNP25Q9BV90 132 aaKnown RBP7.89□□□□□ -1.15
XRN1-212ENST00000486211 SELENOOQ9BVL4 669 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 CHRNA10Q9GZZ6 450 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 VPS16Q9H269 839 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 PCDH9Q9HC56 1237 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 KCNJ16Q9NPI9 418 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 ETNK2Q9NVF9 386 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 STMN3Q9NZ72 180 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 CWC15Q9P013 229 aaKnown RBP7.89□□□□□ -1.15
XRN1-212ENST00000486211 CTSFQ9UBX1 484 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 NPIPA1Q9UND3 350 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 CTNND2Q9UQB3 1225 aa7.89□□□□□ -1.15
XRN1-212ENST00000486211 A0A1W2PQ72 361 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 BICDL2A1A5D9 508 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ANKRD66B4E2M5 251 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 PRRG2O14669 202 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ASNA1O43681 348 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 BMP10O95393 424 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 RAF1P04049 648 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 SERPINA7P05543 415 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ACPPP15309 386 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 HCAR3P49019 387 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 CDH6P55285 790 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 PPP2R2BQ00005 443 aa7.88□□□□□ -1.15
XRN1-212ENST00000486211 ALDH6A1Q02252 535 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms