RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ADAMTSL2Q86TH1 951 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 SLCO6A1Q86UG4 719 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 TDRPQ86YL5 185 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 PLXDC1Q8IUK5 500 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 FBXO15Q8NCQ5 510 aaPredicted RBP11.06□□□□□ -0.64
NUP50-216ENST00000486184 OR9A1PQ8NGU1 263 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 ANKRD49Q8WVL7 239 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 HNRNPLLQ8WVV9 542 aaKnown RBP11.06□□□□□ -0.64
NUP50-216ENST00000486184 ANKRD7Q92527 254 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 ROPN1BQ9BZX4 212 aaPredicted RBP11.06□□□□□ -0.64
NUP50-216ENST00000486184 XKR8Q9H6D3 395 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 ROPN1Q9HAT0 212 aaPredicted RBP11.06□□□□□ -0.64
NUP50-216ENST00000486184 PARVBQ9HBI1 364 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 NMRAL1Q9HBL8 299 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 HRASLS2Q9NWW9 162 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 SPATA7Q9P0W8 599 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 CIDEBQ9UHD4 219 aa11.06□□□□□ -0.64
NUP50-216ENST00000486184 ATXN7L1Q9ULK2 861 aaPredicted RBP11.06□□□□□ -0.64
NUP50-216ENST00000486184 A0A1W2PQM1 296 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 PIPSLA2A3N6 862 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 HMX2A2RU54 273 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 OR5K3A6NET4 321 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 C2orf74A8MZ97 194 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 D6RAR5 112 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 GFYI3L273 518 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 POLR2CP19387 275 aaPredicted RBP11.05□□□□□ -0.64
NUP50-216ENST00000486184 CD1CP29017 333 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 PKLRP30613 574 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 HSD17B2P37059 387 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 AP1S2P56377 157 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 INSM1Q01101 510 aaPredicted RBP11.05□□□□□ -0.64
NUP50-216ENST00000486184 TSTA3Q13630 321 aaPredicted RBP11.05□□□□□ -0.64
NUP50-216ENST00000486184 KRT71Q3SY84 523 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.05□□□□□ -0.64
NUP50-216ENST00000486184 HES3Q5TGS1 186 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 ANKS6Q68DC2 871 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 FBXO38Q6PIJ6 1188 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 WDR74Q6RFH5 385 aaPredicted RBP11.05□□□□□ -0.64
NUP50-216ENST00000486184 USP53Q70EK8 1073 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 SYTL1Q8IYJ3 562 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 GALNT15Q8N3T1 639 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 SPATA6LQ8N4H0 392 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 RSC1A1Q92681 617 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 ZDHHC12Q96GR4 267 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 SCYL1Q96KG9 808 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 CCDC138Q96M89 665 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 TMEM74Q96NL1 305 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 DEPDC7Q96QD5 511 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 EGFL8Q99944 293 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 SLC12A9Q9BXP2 914 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 UNKQ9C0B0 810 aaKnown RBP11.05□□□□□ -0.64
NUP50-216ENST00000486184 RDH14Q9HBH5 336 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 PCMTD2Q9NV79 361 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 ARL15Q9NXU5 204 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 UTP6Q9NYH9 597 aaKnown RBP11.05□□□□□ -0.64
NUP50-216ENST00000486184 OR6C2Q9NZP2 312 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 KLHL3Q9UH77 587 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 ADAMTS6Q9UKP5 1117 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 RNF112Q9ULX5 631 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 NOVA2Q9UNW9 492 aaKnown RBP11.05□□□□□ -0.64
NUP50-216ENST00000486184 ICKQ9UPZ9 632 aa11.05□□□□□ -0.64
NUP50-216ENST00000486184 COL27A1Q8IZC6 1860 aaPredicted RBP11.04□□□□□ -0.64
NUP50-216ENST00000486184 GOLGA6L10A6NI86 522 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 ISM1B1AKI9 464 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 TMX2-CTNND1H3BSU7 103 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 MYO1CO00159 1063 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 CDC7O00311 574 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 NTN3O00634 580 aaPredicted RBP11.04□□□□□ -0.64
NUP50-216ENST00000486184 CAPN5O15484 640 aaPredicted RBP11.04□□□□□ -0.64
NUP50-216ENST00000486184 RASSF9O75901 435 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 KLHL2O95198 593 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 GUCA1CO95843 209 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 MT-CO3P00414 261 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 COL6A2P12110 1019 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 HOXB3P14651 431 aaPredicted RBP11.04□□□□□ -0.64
NUP50-216ENST00000486184 JUPP14923 745 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 CD1DP15813 335 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 TFEBP19484 476 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 IRF9Q00978 393 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 ARHGAP19Q14CB8 494 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 RASA2Q15283 850 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 TSNQ15631 228 aaKnown RBP11.04□□□□□ -0.64
NUP50-216ENST00000486184 TSNAXIP1Q2TAA8 658 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 CCSMST1Q4G0I0 132 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 SNAP47Q5SQN1 464 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 BEND6Q5SZJ8 279 aaPredicted RBP11.04□□□□□ -0.64
NUP50-216ENST00000486184 PHF19Q5T6S3 580 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 TMEM71Q6P5X7 295 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 TAX1BP1Q86VP1 789 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 SPNS2Q8IVW8 549 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 OR4D9Q8NGE8 314 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 OR2L8Q8NGY9 312 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 STAG3L4Q8TBR4 150 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 ACMSDQ8TDX5 336 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 KCTD4Q8WVF5 259 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 ATL1Q8WXF7 558 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 ADAMTS14Q8WXS8 1223 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 EXT2Q93063 718 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 ISL2Q96A47 359 aa11.04□□□□□ -0.64
NUP50-216ENST00000486184 SLC22A18Q96BI1 424 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms