RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 EMC1Q8N766 993 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 CLEC1AQ8NC01 280 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 CHTF18Q8WVB6 975 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 UBXN4Q92575 508 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 SCAMP4Q969E2 229 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 AP2M1Q96CW1 435 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 C18orf8Q96DM3 657 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 AGAP3Q96P47 875 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 CINPQ9BW66 212 aaPredicted RBP6.41□□□□□ -1.38
SMC4-217ENST00000485867 RAB33BQ9H082 229 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 VPS18Q9P253 973 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 ZNF624Q9P2J8 865 aaPredicted RBP6.41□□□□□ -1.38
SMC4-217ENST00000485867 CD84Q9UIB8 345 aa6.41□□□□□ -1.38
SMC4-217ENST00000485867 TRGV8A0A0C4DH27 118 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 A0A1W2PQ67 120 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 FAM170AA1A519 330 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 MASP2O00187 686 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 CCL21O00585 134 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 PCDH17O14917 1159 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 MAFKO60675 156 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 SOCS5O75159 536 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 PALMO75781 387 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 ATP1A1P05023 1023 aaKnown RBP6.4□□□□□ -1.38
SMC4-217ENST00000485867 KLK2P20151 261 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 CMA1P23946 247 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 CDH5P33151 784 aaPredicted RBP6.4□□□□□ -1.38
SMC4-217ENST00000485867 KRT9P35527 623 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 PBX1P40424 430 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 CA7P43166 264 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 SCNN1BP51168 640 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 CLCNKAP51800 687 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 TDGF1P3P51864 188 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 NDUFA8P51970 172 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 AP1S1P61966 158 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 TUBB4BP68371 445 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 Q0VFX4 171 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 CDC16Q13042 620 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 TUBB2AQ13885 445 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 ZNF169Q14929 603 aaPredicted RBP6.4□□□□□ -1.38
SMC4-217ENST00000485867 NCF4Q15080 339 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 GPR19Q15760 415 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 C2CD6Q53TS8 623 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 PRAMEF17Q5VTA0 474 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 ZNF324BQ6AW86 544 aaPredicted RBP6.4□□□□□ -1.38
SMC4-217ENST00000485867 FCRL6Q6DN72 434 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 MTFR2Q6P444 385 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 XKRXQ6PP77 449 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 FAM180AQ6UWF9 173 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 KRBA2Q6ZNG9 492 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 KMT5CQ86Y97 462 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 PHYKPLQ8IUZ5 450 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 CEP97Q8IW35 865 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 TRIM48Q8IWZ4 208 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 KBTBD2Q8IY47 623 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 PYROXD2Q8N2H3 581 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 D2HGDHQ8N465 521 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 KLHL36Q8N4N3 616 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 BCORP1Q8N888 145 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 TMEM35BQ8NCS4 154 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 OR8K5Q8NH50 307 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 COG1Q8WTW3 980 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 SNX21Q969T3 373 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 NTAN1Q96AB6 310 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 ZNF501Q96CX3 271 aaPredicted RBP6.4□□□□□ -1.38
SMC4-217ENST00000485867 MTFMTQ96DP5 389 aaKnown RBP6.4□□□□□ -1.38
SMC4-217ENST00000485867 FER1L6-AS2Q96M78 137 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 IP6K3Q96PC2 410 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 MCCC1Q96RQ3 725 aaPredicted RBP6.4□□□□□ -1.38
SMC4-217ENST00000485867 AGAP2Q99490 1192 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 TUBB2BQ9BVA1 445 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 LRRC19Q9H756 370 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 SLC6A20Q9NP91 592 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 DLL4Q9NR61 685 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 POT1Q9NUX5 634 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 OLAHQ9NV23 265 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 RCOR1Q9UKL0 485 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 TSC22D4Q9Y3Q8 395 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 PCDHGB6Q9Y5F9 930 aa6.4□□□□□ -1.38
SMC4-217ENST00000485867 HCFC1P51610 2035 aa6.4□□□□□ -1.39
SMC4-217ENST00000485867 ATRQ13535 2644 aa6.4□□□□□ -1.39
SMC4-217ENST00000485867 TLN2Q9Y4G6 2542 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 FAM237AA0A1B0GTK4 181 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.39□□□□□ -1.39
SMC4-217ENST00000485867 CCDC78A2IDD5 438 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 NPEPPSL1A6NEC2 478 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 TLCD2A6NGC4 264 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 CREB3O43889 395 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 DLX3O60479 287 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 PYGLP06737 847 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 SOX8P57073 446 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 ADORA2A-AS1P86434 159 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 APBA1Q02410 837 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 NSUN2Q08J23 767 aaKnown RBP eCLIP6.39□□□□□ -1.39
SMC4-217ENST00000485867 TRAF2Q12933 501 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 ABRQ12979 859 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 GPR18Q14330 331 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 ASIC2Q16515 512 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 PTCHD3Q3KNS1 767 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 CCDC14Q49A88 953 aa6.39□□□□□ -1.39
SMC4-217ENST00000485867 PLEKHA7Q6IQ23 1121 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms