RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 LIMA1Q9UHB6 759 aaKnown RBP4.31□□□□□ -1.72
SMARCC1-207ENST00000485833 FBXW11Q9UKB1 542 aa4.31□□□□□ -1.72
SMARCC1-207ENST00000485833 ZNF292O60281 2723 aa4.31□□□□□ -1.72
SMARCC1-207ENST00000485833 SETXQ7Z333 2677 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 MAPK8IP3Q9UPT6 1336 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 ANKRD66B4E2M5 251 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 HCRTR2O43614 444 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 BUD23O43709 281 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 NDUFS3O75489 264 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 DAB1O75553 588 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 BAG4O95429 457 aaKnown RBP4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 CLEC3BP05452 202 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 CLTBP09497 229 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 CYBAP13498 195 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 NR2F2P24468 414 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 TAS2R40P59535 323 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 SPP2Q13103 211 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 GCKRQ14397 625 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 TBCEQ15813 527 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 TMEM30BQ3MIR4 351 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 SFMBT2Q5VUG0 894 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 FKBP1CQ5VVH2 108 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 NSUN5P2Q63ZY6 315 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 ARHGAP17Q68EM7 881 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 ARHGAP11AQ6P4F7 1023 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 Q75L30 129 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 DGLUCYQ7Z3D6 616 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 EXOC8Q8IYI6 725 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 PM20D2Q8IYS1 436 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 RNF168Q8IYW5 571 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 PCYOX1LQ8NBM8 494 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 HM13Q8TCT9 377 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 RFFLQ8WZ73 363 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 STAMBPL1Q96FJ0 436 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 PDZD7Q9H5P4 517 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 POLR1BQ9H9Y6 1135 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 TMOD2Q9NZR1 351 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 KLHL9Q9P2J3 617 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 ZNF624Q9P2J8 865 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 MTCH2Q9Y6C9 303 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 KCNE2Q9Y6J6 123 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 ANKRD11Q6UB99 2663 aaPredicted RBP4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 CDK5RAP2Q96SN8 1893 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 CEP250Q9BV73 2442 aa4.3□□□□□ -1.72
SMARCC1-207ENST00000485833 FASNP49327 2511 aaKnown RBP4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 MYO7AQ13402 2215 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 ATG2AQ2TAZ0 1938 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 UMODL1Q5DID0 1318 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 EP300Q09472 2414 aaPredicted RBP4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 ANKRD18BA2A2Z9 1011 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 BLOC1S5-TXNDC5H3BN57 136 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 MAP2K7O14733 419 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 PCDH7O60245 1069 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 RTN3O95197 1032 aaPredicted RBP4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 CCNDBP1O95273 360 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 KCNK5O95279 499 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 ICAM1P05362 532 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 HOXB7P09629 217 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 IL9P15248 144 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 ERVK11-1P61568 191 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 TSTQ16762 297 aaKnown RBP4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 ZNF876PQ49A33 203 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 WDR38Q5JTN6 314 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 GORABQ5T7V8 394 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 PIWIL4Q7Z3Z4 852 aaKnown RBP4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 FRMD1Q8N878 549 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 NAXEQ8NCW5 288 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 RBM15BQ8NDT2 890 aaKnown RBP4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 TAS1R2Q8TE23 839 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 PPP4R1Q8TF05 950 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 LGALS12Q96DT0 336 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 EGLN2Q96KS0 407 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 NEUROD6Q96NK8 337 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 WDFY2Q96P53 400 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 SMC6Q96SB8 1091 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 LITAFQ99732 161 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 BARHL1Q9BZE3 327 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 TMEM184BQ9Y519 407 aaPredicted RBP4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 ZNF236Q9UL36 1845 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 ZFYVE26Q68DK2 2539 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 FRYLO94915 3013 aa4.29□□□□□ -1.72
SMARCC1-207ENST00000485833 FAM237BA0A1B0GVD1 139 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 A0A1W2PPI3 338 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 MED19A0JLT2 244 aaPredicted RBP4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 C5orf60A6NFR6 353 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 SMIM1B2RUZ4 78 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 TMEM63AO94886 807 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 PGK1P00558 417 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 PATE4P0C8F1 98 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 ZNF853P0CG23 659 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 MCCP23508 829 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 ELF1P32519 619 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 VEGFCP49767 419 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 TFAP4Q01664 338 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 NIPAL4Q0D2K0 466 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 PPIGQ13427 754 aaKnown RBP eCLIP4.28□□□□□ -1.724e-7■■□□□ 11.9
SMARCC1-207ENST00000485833 KIR2DS3Q14952 304 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 RAB6CQ53S08 254 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 LRIF1Q5T3J3 769 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 MMS22LQ6ZRQ5 1243 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms