RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 EPHA8P29322 1005 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC8A1P32418 973 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 BSGP35613 385 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 GGT5P36269 586 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 GARSP41250 739 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CCR10P46092 362 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 RPL21P46778 160 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 NRIP1P48552 1158 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ALDH7A1P49419 539 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 KHKP50053 298 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 DNA2P51530 1060 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ARSEP51690 589 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 VAMP7P51809 220 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 METAP1P53582 386 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SNU13P55769 128 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 RAB14P61106 215 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CYP4F2P78329 520 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 MRPS9P82933 396 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 TNFRSF17Q02223 184 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 GCNT1Q02742 428 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 PPP3CAQ08209 521 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 LGALS3BPQ08380 585 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 NIPAL4Q0D2K0 466 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CSTF3Q12996 717 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CALCOCO2Q13137 446 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC29A2Q14542 456 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ZNF268Q14587 947 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 GRM7Q14831 915 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 BCL2A1Q16548 175 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 GALNTL6Q49A17 601 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC9B1Q4ZJI4 515 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ZC2HC1CQ53FD0 456 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 FASTKD1Q53R41 847 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 PLAC9Q5JTB6 97 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 C10orf120Q5SQS8 335 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 RARS2Q5T160 578 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 VWA5B1Q5TIE3 1220 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 KRT39Q6A163 491 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 PPP1R2P3Q6NXS1 205 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CYB5D1Q6P9G0 228 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 INO80CQ6PI98 192 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ZNF852Q6ZMS4 543 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 MACC1Q6ZN28 852 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ZNF627Q7L945 461 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 POLNQ7Z5Q5 900 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 DSG4Q86SJ6 1040 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 AKAP14Q86UN6 197 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 FJX1Q86VR8 437 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 PALB2Q86YC2 1186 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CAMK1DQ8IU85 385 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 C1orf210Q8IVY1 113 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 C4orf19Q8IY42 314 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ELMOD2Q8IZ81 293 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 RIBC1Q8N443 379 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 LEMD2Q8NC56 503 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CPT1CQ8TCG5 803 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ACTRT2Q8TDY3 377 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC22A17Q8WUG5 538 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 DYDC1Q8WWB3 177 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 NEU4Q8WWR8 484 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 LZICQ8WZA0 190 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 GLG1Q92896 1179 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 LRRC46Q96FV0 321 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC35A4Q96G79 324 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 RAX2Q96IS3 184 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ZBED3Q96IU2 234 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 RPL10LQ96L21 214 aaKnown RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SNX22Q96L94 193 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CEP19Q96LK0 163 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 ELF4Q99607 663 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SEMA3CQ99985 751 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 MXRA8Q9BRK3 442 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 LXNQ9BS40 222 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 TRIM51Q9BSJ1 452 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 EDEM2Q9BV94 578 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 IMPG2Q9BZV3 1241 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 TRIM4Q9C037 500 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 RAB33BQ9H082 229 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 TMEM117Q9H0C3 514 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC25A18Q9H1K4 315 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SLC26A1Q9H2B4 701 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 MS4A5Q9H3V2 200 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 POLR1BQ9H9Y6 1135 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 LTB4R2Q9NPC1 389 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 C8orf4Q9NR00 106 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 KLHL28Q9NXS3 571 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 EURLQ9NYK6 297 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 TAS2R14Q9NYV8 317 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CNIH4Q9P003 139 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 SENP1Q9P0U3 644 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 KLHL9Q9P2J3 617 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 WRAP73Q9P2S5 460 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 UXTQ9UBK9 157 aaPredicted RBP3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 LGALS13Q9UHV8 139 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CPA4Q9UI42 421 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CYTH4Q9UIA0 394 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CDH7Q9ULB5 785 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 CHMP2BQ9UQN3 213 aa3.96□□□□□ -1.78
PRPF38B-205ENST00000485810 MRPS7Q9Y2R9 242 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms