RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 HPS6Q86YV9 775 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 DNAJC22Q8N4W6 341 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 UBL4BQ8N7F7 174 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 OR13J1Q8NGT2 312 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 HDAC10Q969S8 669 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 PNPLA2Q96AD5 504 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 C19orf60Q96EN9 201 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 CHRNA10Q9GZZ6 450 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 OR6C2Q9NZP2 312 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 MAP10Q9P2G4 905 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 PLEKHB1Q9UF11 243 aaPredicted RBP18.55■□□□□ 0.56
COL27A1-205ENST00000485397 SLC2A6Q9UGQ3 507 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 GPN3Q9UHW5 284 aaPredicted RBP18.55■□□□□ 0.56
COL27A1-205ENST00000485397 CDYLQ9Y232 598 aa18.55■□□□□ 0.56
COL27A1-205ENST00000485397 SPTBN1Q01082 2364 aaKnown RBP18.54■□□□□ 0.56
COL27A1-205ENST00000485397 ZSCAN9O15535 394 aaPredicted RBP18.54■□□□□ 0.56
COL27A1-205ENST00000485397 KRT86O43790 486 aa18.54■□□□□ 0.56
COL27A1-205ENST00000485397 FOLR3P41439 243 aa18.54■□□□□ 0.56
COL27A1-205ENST00000485397 DCDP81605 110 aaKnown RBP18.54■□□□□ 0.56
COL27A1-205ENST00000485397 LINC00523Q86TU6 105 aa18.54■□□□□ 0.56
COL27A1-205ENST00000485397 DNAAF3Q8N9W5 541 aa18.54■□□□□ 0.56
COL27A1-205ENST00000485397 LMNTD1Q8N9Z9 388 aa18.54■□□□□ 0.56
COL27A1-205ENST00000485397 PROKR1Q8TCW9 393 aa18.54■□□□□ 0.56
COL27A1-205ENST00000485397 SSC4DQ8WTU2 575 aa18.54■□□□□ 0.56
COL27A1-205ENST00000485397 ATG4AQ8WYN0 398 aa18.54■□□□□ 0.56
COL27A1-205ENST00000485397 MRFAP1L1Q96HT8 127 aa18.54■□□□□ 0.56
COL27A1-205ENST00000485397 C17orf62Q9BQA9 187 aa18.54■□□□□ 0.56
COL27A1-205ENST00000485397 IRAK4Q9NWZ3 460 aa18.54■□□□□ 0.56
COL27A1-205ENST00000485397 IFT80Q9P2H3 777 aaPredicted RBP18.54■□□□□ 0.56
COL27A1-205ENST00000485397 KLHL20Q9Y2M5 609 aa18.54■□□□□ 0.56
COL27A1-205ENST00000485397 MIF4GDA9UHW6 222 aaKnown RBP18.53■□□□□ 0.56
COL27A1-205ENST00000485397 GOT2P00505 430 aaKnown RBP18.53■□□□□ 0.56
COL27A1-205ENST00000485397 GRIA1P42261 906 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 PLOD1Q02809 727 aaPredicted RBP18.53■□□□□ 0.56
COL27A1-205ENST00000485397 CDH17Q12864 832 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 SLC5A12Q1EHB4 618 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 PLEKHN1Q494U1 663 aaPredicted RBP18.53■□□□□ 0.56
COL27A1-205ENST00000485397 VWA5B1Q5TIE3 1220 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 VRK3Q8IV63 474 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 FER1L6-AS2Q96M78 137 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 IP6K3Q96PC2 410 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 ETNK1Q9HBU6 452 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 CASS4Q9NQ75 786 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 TXLNGQ9NUQ3 528 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 CCDC88CQ9P219 2028 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 C5AR2Q9P296 337 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 NDOR1Q9UHB4 597 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 CIDEBQ9UHD4 219 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 PLCL2Q9UPR0 1127 aa18.53■□□□□ 0.56
COL27A1-205ENST00000485397 PEX12O00623 359 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 CCR7P32248 378 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 SEMA3AQ14563 771 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 KIR2DS3Q14952 304 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 NKAIN1Q4KMZ8 207 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 DCAF10Q5QP82 559 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 TSTD2Q5T7W7 516 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 LYPLAL1Q5VWZ2 237 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 MRPL14Q6P1L8 145 aaKnown RBP18.52■□□□□ 0.56
COL27A1-205ENST00000485397 TLDC1Q6P9B6 456 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 AFTPHQ6ULP2 937 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 ZNF534Q76KX8 674 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 PPP1R32Q7Z5V6 425 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 SYCE1Q8N0S2 351 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 C2orf73Q8N5S3 287 aaPredicted RBP18.52■□□□□ 0.56
COL27A1-205ENST00000485397 OR2Y1Q8NGV0 311 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 LKAAEAR1Q8TD35 194 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 ZNF778Q96MU6 729 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 AP1M1Q9BXS5 423 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 SLC22A11Q9NSA0 550 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 P4HTMQ9NXG6 502 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 SRPK3Q9UPE1 567 aa18.52■□□□□ 0.56
COL27A1-205ENST00000485397 NBPF19A0A087WUL8 3843 aa18.52■□□□□ 0.55
COL27A1-205ENST00000485397 HEATR9A2RTY3 570 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 IQCF5A8MTL0 148 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 UMODP07911 640 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 MAGP20916 626 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 PKLRP30613 574 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 HSPA14Q0VDF9 509 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 MYBPC3Q14896 1274 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 PPP1R21Q6ZMI0 780 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 PRUNE1Q86TP1 453 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 SLC22A15Q8IZD6 547 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 GALNT16Q8N428 558 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 LINC01555Q8NAE3 123 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 CLEC1AQ8NC01 280 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 OR4L1Q8NH43 312 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 CFAP61Q8NHU2 1237 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 PRR7Q8TB68 274 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 PTERQ96BW5 349 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 SNRNP40Q96DI7 357 aaKnown RBP18.51■□□□□ 0.55
COL27A1-205ENST00000485397 IL17FQ96PD4 163 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 DESI2Q9BSY9 194 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 NDC1Q9BTX1 674 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 SLC29A3Q9BZD2 475 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 RBSNQ9H1K0 784 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 ZNF552Q9H707 407 aaPredicted RBP18.51■□□□□ 0.55
COL27A1-205ENST00000485397 EURLQ9NYK6 297 aa18.51■□□□□ 0.55
COL27A1-205ENST00000485397 SNRNP200O75643 2136 aaKnown RBP18.5■□□□□ 0.55
COL27A1-205ENST00000485397 KDM1AO60341 852 aa18.5■□□□□ 0.55
COL27A1-205ENST00000485397 SUN1O94901 812 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms