RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 TNFRSF10AO00220 468 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 IFRD1O00458 451 aaPredicted RBP14.13□□□□□ -0.15
LRIF1-202ENST00000485275 OR7A17O14581 309 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 SDC3O75056 442 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 HSPA4LO95757 839 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 FAM107AO95990 144 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 S100BP04271 92 aaPredicted RBP14.13□□□□□ -0.15
LRIF1-202ENST00000485275 HIST1H2AGP0C0S8 130 aaPredicted RBP14.13□□□□□ -0.15
LRIF1-202ENST00000485275 MTHFD1P11586 935 aaKnown RBP14.13□□□□□ -0.15
LRIF1-202ENST00000485275 HIST1H2ADP20671 130 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 MAP4P27816 1152 aaKnown RBP14.13□□□□□ -0.15
LRIF1-202ENST00000485275 MAPK9P45984 424 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 SH3BP2P78314 561 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 CLCQ05315 142 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 ILF3Q12906 894 aaKnown RBP eCLIP14.13□□□□□ -0.15
LRIF1-202ENST00000485275 KIF19Q2TAC6 998 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 CFAP157Q5JU67 520 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 CDKL4Q5MAI5 379 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 ANKS6Q68DC2 871 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 AGTRAPQ6RW13 159 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 WASH2PQ6VEQ5 465 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 GOLGA7Q7Z5G4 137 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 C11orf74Q86VG3 221 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 RFWD2Q8NHY2 731 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 TRPC4APQ8TEL6 797 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 HIST1H2AHQ96KK5 128 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 CNDP1Q96KN2 507 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 HIST1H2AJQ99878 128 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 H2AFJQ9BTM1 129 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 COL25A1Q9BXS0 654 aaPredicted RBP14.13□□□□□ -0.15
LRIF1-202ENST00000485275 WASH6PQ9NQA3 447 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 HAO1Q9UJM8 370 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 TDRKHQ9Y2W6 561 aaKnown RBP14.13□□□□□ -0.15
LRIF1-202ENST00000485275 SNX11Q9Y5W9 270 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 ADAMTS9Q9P2N4 1935 aa14.13□□□□□ -0.15
LRIF1-202ENST00000485275 TRBV23OR9-2A0A075B6M9 112 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 CCNT2O60583 730 aaKnown RBP14.12□□□□□ -0.15
LRIF1-202ENST00000485275 PRAMEF4O60810 478 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 JUNP05412 331 aaKnown RBP14.12□□□□□ -0.15
LRIF1-202ENST00000485275 KITP10721 976 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 ERGP11308 486 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 F3P13726 295 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 CTSKP43235 329 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 FOXA1P55317 472 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 ASPHQ12797 758 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 LPAL2Q16609 132 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 PRAMEF9Q5VWM5 478 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 RAB44Q7Z6P3 723 aaPredicted RBP14.12□□□□□ -0.15
LRIF1-202ENST00000485275 CUZD1Q86UP6 607 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 NAGSQ8N159 534 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 OR9A1PQ8NGU1 263 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 BCAS4Q8TDM0 211 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 AGAP11Q8TF27 550 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 ZNF473Q8WTR7 871 aaKnown RBP14.12□□□□□ -0.15
LRIF1-202ENST00000485275 SREK1Q8WXA9 508 aaKnown RBP14.12□□□□□ -0.15
LRIF1-202ENST00000485275 JPH3Q8WXH2 748 aaPredicted RBP14.12□□□□□ -0.15
LRIF1-202ENST00000485275 CCDC138Q96M89 665 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 CDK15Q96Q40 435 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 OR4K3Q96R72 315 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 KCNA7Q96RP8 456 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 TRIM54Q9BYV2 358 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 NPHS2Q9NP85 383 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 INTS7Q9NVH2 962 aaKnown RBP14.12□□□□□ -0.15
LRIF1-202ENST00000485275 UCKL1Q9NWZ5 548 aa14.12□□□□□ -0.15
LRIF1-202ENST00000485275 A0A1B0GTW7 788 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 ZNF195O14628 629 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 SLC19A1P41440 591 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 HNMTP50135 292 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 TBPL1P62380 186 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 LCP2Q13094 533 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 TRAF3Q13114 568 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 GTF2H2Q13888 395 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 SHBQ15464 509 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 GTF2H2CQ6P1K8 395 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 CEP68Q76N32 757 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 SYVN1Q86TM6 617 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 TBC1D21Q8IYX1 336 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 TEX9Q8N6V9 391 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 LINC01555Q8NAE3 123 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 ZNF548Q8NEK5 533 aaPredicted RBP14.11□□□□□ -0.15
LRIF1-202ENST00000485275 OR56A3Q8NH54 315 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 PIGKQ92643 395 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 FERD3LQ96RJ6 166 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 ELAC2Q9BQ52 826 aaKnown RBP14.11□□□□□ -0.15
LRIF1-202ENST00000485275 GSDMCQ9BYG8 508 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 TRIT1Q9H3H1 467 aaKnown RBP14.11□□□□□ -0.15
LRIF1-202ENST00000485275 KCNK13Q9HB14 408 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.11□□□□□ -0.15
LRIF1-202ENST00000485275 SH2B3Q9UQQ2 575 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 SLC22A14Q9Y267 594 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 RAP2CQ9Y3L5 183 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 PATE3B3GLJ2 98 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 E7ENX8 843 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 K7EPI3 171 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 SNX3O60493 162 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 STK16O75716 305 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 WDR47O94967 919 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 CTSEP14091 401 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 SERPINB5P36952 375 aa14.11□□□□□ -0.15
LRIF1-202ENST00000485275 BLKP51451 505 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms