RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 HIST1H2AJQ99878 128 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 H2AFJQ9BTM1 129 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 IL1RL2Q9HB29 575 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 CD207Q9UJ71 328 aa8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 PRPF19Q9UMS4 504 aaKnown RBP8.62□□□□□ -1.03
CDC42SE1-204ENST00000483763 C1QTNF3-AMACRE9PGA6 284 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 FXYD1O00168 92 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 MRASO14807 208 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 KPNA5O15131 536 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 ADAM23O75077 832 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 VPS4BO75351 444 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 ULK1O75385 1050 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 ENO2P09104 434 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 GSTM1P09488 218 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 EBLN1P0CF75 366 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 HMOX2P30519 316 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 BDKRB1P46663 353 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 GSTM4Q03013 218 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 CDC16Q13042 620 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 HTR4Q13639 388 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 RCAN2Q14206 197 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 PTGR1Q14914 329 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 RPS6KA2Q15349 733 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 NR6A1Q15406 480 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 CCDC6Q16204 474 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 GSTA3Q16772 222 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 WSCD2Q2TBF2 565 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 AP5B1Q2VPB7 878 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 ATP6AP1LQ52LC2 224 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 TMEM196Q5HYL7 178 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 CDKL4Q5MAI5 379 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 PTCRAQ6ISU1 281 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 CRTC3Q6UUV7 619 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 NEK10Q6ZWH5 1172 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 MTSS1LQ765P7 747 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 DSG4Q86SJ6 1040 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 RGL4Q8IZJ4 473 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 RNF175Q8N4F7 328 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 MCOLN3Q8TDD5 553 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 SLC26A7Q8TE54 656 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 OR4K3Q96R72 315 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 NRTNQ99748 197 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 BRINP2Q9C0B6 783 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 PCDHAC1Q9H158 963 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 ACTR8Q9H981 624 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 TRIM39Q9HCM9 518 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 MBNL1Q9NR56 388 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 TM7SF3Q9NS93 570 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 ADA2Q9NZK5 511 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 NOP53Q9NZM5 478 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 KCNE1BA0A087WTH5 132 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 ACOT8O14734 319 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 ANKRD28O15084 1053 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 MAP3K7O43318 606 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 CLDN9O95484 217 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 PAK4O96013 591 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 CD22P20273 847 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 HNMTP50135 292 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 SLC34A1Q06495 639 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 SP140Q13342 867 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 CAPRIN1Q14444 709 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 NFE2L1Q14494 772 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 MAPRE2Q15555 327 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 SYTL3Q4VX76 610 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 PAGE3Q5JUK9 113 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 METTL2BQ6P1Q9 378 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 FAM83HQ6ZRV2 1179 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 ZNF765Q7L2R6 523 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 EFL1Q7Z2Z2 1120 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 TRIM46Q7Z4K8 759 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 SPATA19Q7Z5L4 167 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 KBTBD6Q86V97 674 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 HEATR4Q86WZ0 1026 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 SLC22A15Q8IZD6 547 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 HDDC3Q8N4P3 179 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 CXorf40AQ8TE69 158 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 KLK6Q92876 244 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 USP7Q93009 1102 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 NECTIN4Q96NY8 510 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 TRIM54Q9BYV2 358 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 SLC23A2Q9UGH3 650 aa8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 ZNF490Q9ULM2 529 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 ZFR2Q9UPR6 939 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 ZFC3H1O60293 1989 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-204ENST00000483763 LAMA1P25391 3075 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 FRYLO94915 3013 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 ANHXE9PGG2 379 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 H3BNX3 289 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 MANBAO00462 879 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 SLC16A5O15375 505 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 SLC22A3O75751 556 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 POP7O75817 140 aaKnown RBP8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 PCDH8O95206 1070 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 EGFP01133 1207 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 PDYNP01213 254 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 LMNAP02545 664 aaKnown RBP8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 FUCA1P04066 466 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 PCCBP05166 539 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 ANPEPP15144 967 aa8.6□□□□□ -1.03
CDC42SE1-204ENST00000483763 CYP2A7P20853 494 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms