RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.75□□□□□ -1.494e-12■■■□□ 16.7
CSDE1-207ENST00000483407 OGFRQ9NZT2 677 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 ZNF624Q9P2J8 865 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-207ENST00000483407 NFKBIL1Q9UBC1 381 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-207ENST00000483407 EPHA6Q9UF33 1036 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 LCMT1Q9UIC8 334 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 TLK1Q9UKI8 766 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 RARRES3Q9UL19 164 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 SHOC2Q9UQ13 582 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 SLC30A1Q9Y6M5 507 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 ANKRD36A6QL64 1941 aa5.75□□□□□ -1.49
CSDE1-207ENST00000483407 ARHGEF17Q96PE2 2063 aaPredicted RBP5.75□□□□□ -1.49
CSDE1-207ENST00000483407 OR52A4PA6NMU1 304 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 ZNF561-AS1K7EIQ3 104 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 K7EM74 188 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 KCNK1O00180 336 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 KIF1CO43896 1103 aaKnown RBP5.74□□□□□ -1.49
CSDE1-207ENST00000483407 KCNJ13O60928 360 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 MBD3O95983 291 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 JCHAINP01591 159 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 SERPING1P05155 500 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 CYP1A2P05177 515 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 MMP2P08253 660 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 ZGLP1P0C6A0 271 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 NELFEP18615 380 aaKnown RBP5.74□□□□□ -1.49
CSDE1-207ENST00000483407 TNNT3P45378 269 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-207ENST00000483407 ARSEP51690 589 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 NEK2P51955 445 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 PGDP52209 483 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 GBE1Q04446 702 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 PPIDQ08752 370 aaKnown RBP5.74□□□□□ -1.49
CSDE1-207ENST00000483407 FAPQ12884 760 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 IKZF1Q13422 519 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 TUBB3Q13509 450 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 SEMA5AQ13591 1074 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 GPR18Q14330 331 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 GALNT3Q14435 633 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 PLCL1Q15111 1095 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 GPR19Q15760 415 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 ATP13A4Q4VNC1 1196 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 ZNF648Q5T619 568 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-207ENST00000483407 AGAP9Q5VTM2 703 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 ZDHHC20Q5W0Z9 365 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 ALKBH5Q6P6C2 394 aaKnown RBP5.74□□□□□ -1.49
CSDE1-207ENST00000483407 FAM92BQ6ZTR7 304 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 SYVN1Q86TM6 617 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 NT5DC3Q86UY8 548 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 TRAPPC5Q8IUR0 188 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 CISD2Q8N5K1 135 aaKnown RBP5.74□□□□□ -1.49
CSDE1-207ENST00000483407 CNTD1Q8N815 330 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 GPR26Q8NDV2 337 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 GDAP1Q8TB36 358 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 CPT1CQ8TCG5 803 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 BRSK1Q8TDC3 778 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-207ENST00000483407 CT55Q8WUE5 264 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 CHTF18Q8WVB6 975 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 RSC1A1Q92681 617 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 SYN2Q92777 582 aaPredicted RBP5.74□□□□□ -1.49
CSDE1-207ENST00000483407 RNF31Q96EP0 1072 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 VPS35Q96QK1 796 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 CD180Q99467 661 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 KCNJ15Q99712 375 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 BPIFA3Q9BQP9 254 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 SLC25A23Q9BV35 468 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 GPR87Q9BY21 358 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 XPO4Q9C0E2 1151 aaKnown RBP5.74□□□□□ -1.49
CSDE1-207ENST00000483407 RAB33BQ9H082 229 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 BRD8Q9H0E9 1235 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 ACTL8Q9H568 366 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 SMURF1Q9HCE7 757 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 SLC40A1Q9NP59 571 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 ACSS2Q9NR19 701 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 SPTLC3Q9NUV7 552 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 DTLQ9NZJ0 730 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 UVRAGQ9P2Y5 699 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 TRIM10Q9UDY6 481 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 SLC23A2Q9UGH3 650 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 ZNF711Q9Y462 761 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 SPEF1Q9Y4P9 236 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 DOPEY2Q9Y3R5 2298 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 RELNP78509 3460 aa5.74□□□□□ -1.49
CSDE1-207ENST00000483407 A0A1W2PQJ5 194 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 UBA6A0AVT1 1052 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 C22orf46C9J442 243 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 ULK1O75385 1050 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 MTX2O75431 263 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 DNAJB5O75953 348 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 PRKD3O94806 890 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 PROSCO94903 275 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 AMY2AP04746 511 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 KLK3P07288 261 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 PIRTP0C851 137 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 BRAFP15056 766 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 FOLR1P15328 257 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 AMY2BP19961 511 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 GNLYP22749 145 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 FPR2P25090 351 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 PTPN4P29074 926 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 UQCRFS1P47985 274 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms