RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 ADALQ6DHV7 355 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 SPINK14Q6IE38 97 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 RAB12Q6IQ22 244 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 BHLHB9Q6PI77 547 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 PACS1Q6VY07 963 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 CCDC73Q6ZRK6 1079 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 MCM10Q7L590 875 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 SH2D6Q7Z4S9 175 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 SCML4Q8N228 414 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 FAM222BQ8WU58 562 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 ZFAND2BQ8WV99 257 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 PTP4A1Q93096 173 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 ERO1AQ96HE7 468 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 CABS1Q96KC9 395 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 C16orf45Q96MC5 204 aaPredicted RBP2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 TMEM68Q96MH6 324 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 SPXQ9BT56 116 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 CABLES2Q9BTV7 478 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 STRA6Q9BX79 667 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 C1orf21Q9H246 121 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 TNMDQ9H2S6 317 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 POLR1BQ9H9Y6 1135 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 SCPEP1Q9HB40 452 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 APOBEC3GQ9HC16 384 aaKnown RBP2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 IL1RAPL2Q9NP60 686 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 RRP7BPQ9NSQ0 103 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 BARHL2Q9NY43 387 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 DLGAP2Q9P1A6 1054 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 CNOT8Q9UFF9 292 aaKnown RBP2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 DUSP12Q9UNI6 340 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 RABL2BQ9UNT1 228 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 CLIC4Q9Y696 253 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 SESN1Q9Y6P5 492 aa2.77□□□□□ -1.97
LAPTM4A-202ENST00000483117 hCG_1809904A0A1W2PP81 198 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 A0A1W2PPE2 198 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 A0A1W2PR64 198 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 A0A1W2PRG0 241 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 FRMD3A2A2Y4 597 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 MEIOCA2RUB1 952 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 LRRD1A4D1F6 860 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 EIF4E1BA6NMX2 242 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 H0YAE9 185 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 SCAMP1O15126 338 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 PGRMC2O15173 223 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 TXNL1O43396 289 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 BUD23O43709 281 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 KERAO60938 352 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 IPO7O95373 1038 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 GUCA1CO95843 209 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 FDPSP14324 419 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 GAP43P17677 238 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 GARSP41250 739 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 STAT2P52630 851 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 PPP5CP53041 499 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 LIMK1P53667 647 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 CDH8P55286 799 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 HSD17B7P56937 341 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 UBASH3AP57075 661 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 MRPS5P82675 430 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 CEBPZQ03701 1054 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 NIPAL4Q0D2K0 466 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 CSTF3Q12996 717 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 ZNF239Q16600 458 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 DUOXA1Q1HG43 343 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 ASPRV1Q53RT3 343 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 TOR1AIP1Q5JTV8 583 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 ADAMTSL4-AS1Q5T5F5 129 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 UNC5DQ6UXZ4 953 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 LINC00696Q6ZRV3 163 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 ERN2Q76MJ5 926 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 CHST9Q7L1S5 443 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 NUP54Q7Z3B4 507 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 PIWIL3Q7Z3Z3 882 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 GLRX5Q86SX6 157 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 ADCK1Q86TW2 530 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 ARHGAP12Q8IWW6 846 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 ZNF843Q8N446 348 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 DENND6BQ8NEG7 585 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 OR1J2Q8NGS2 313 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 OR2T6Q8NHC8 308 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 KIF18AQ8NI77 898 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 FBXO30Q8TB52 745 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 SLC22A18Q96BI1 424 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 MMABQ96EY8 250 aaPredicted RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 SAT2Q96F10 170 aaPredicted RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 CCDC114Q96M63 670 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 GCNAQ96QF7 691 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 ATP6V0BQ99437 205 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 SEMA3CQ99985 751 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 PIGMQ9H3S5 423 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 OSGEPL1Q9H4B0 414 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 MID1IP1Q9NPA3 183 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 MBNL1Q9NR56 388 aaKnown RBP2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 PSD3Q9NYI0 1048 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 C5AR2Q9P296 337 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 TBK1Q9UHD2 729 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 AMACRQ9UHK6 382 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 CTNNA3Q9UI47 895 aa2.76□□□□□ -1.97
LAPTM4A-202ENST00000483117 SH3BGRL2Q9UJC5 107 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms