RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 OSBPL10Q9BXB5 764 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 TRIM39Q9HCM9 518 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 TLR8Q9NR97 1041 aaKnown RBP12.45□□□□□ -0.42
VPS52-218ENST00000482399 C1orf109Q9NX04 203 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 TLR6Q9Y2C9 796 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 PCDHB5Q9Y5E4 795 aa12.45□□□□□ -0.42
VPS52-218ENST00000482399 MROH6A6NGR9 719 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 NDUFB5O43674 189 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 RPS17P08708 135 aaKnown RBP12.44□□□□□ -0.42
VPS52-218ENST00000482399 RPL9P32969 192 aaKnown RBP12.44□□□□□ -0.42
VPS52-218ENST00000482399 SERINC3Q13530 473 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 RNF219Q5W0B1 726 aaPredicted RBP12.44□□□□□ -0.42
VPS52-218ENST00000482399 ADAMTSL2Q86TH1 951 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 ARMC8Q8IUR7 673 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 UMODL1-AS1Q8N2C9 162 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 TTC30BQ8N4P2 665 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 SVOPQ8N4V2 548 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 BPIFB1Q8TDL5 484 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 PRRG3Q9BZD7 231 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 RMND5AQ9H871 391 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 VPS9D1Q9Y2B5 631 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 FCF1Q9Y324 198 aaKnown RBP12.44□□□□□ -0.42
VPS52-218ENST00000482399 AXIN1O15169 862 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 SLC22A1O15245 554 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 INSIG1O15503 277 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 PRAMEF1O95521 474 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 KRT6AP02538 564 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 KRT6BP04259 564 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 HIST1H2AGP0C0S8 130 aaPredicted RBP12.44□□□□□ -0.42
VPS52-218ENST00000482399 HIST1H2ADP20671 130 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 KRT6CP48668 564 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 DLEU7Q6UYE1 221 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 PLEKHG7Q6ZR37 379 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 SYT12Q8IV01 421 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 SLC16A10Q8TF71 515 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 HIST1H2AHQ96KK5 128 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 HIST1H2AJQ99878 128 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 H2AFJQ9BTM1 129 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 RNF167Q9H6Y7 350 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 ARNT2Q9HBZ2 717 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 FAM32AQ9Y421 112 aaKnown RBP12.44□□□□□ -0.42
VPS52-218ENST00000482399 TNPO3Q9Y5L0 923 aaKnown RBP12.44□□□□□ -0.42
VPS52-218ENST00000482399 THSD7AQ9UPZ6 1657 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 MED26O95402 600 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 CAPNS1P04632 268 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 ALOX5P09917 674 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 C7P10643 843 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 COX7A2P14406 83 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 ZNF7P17097 686 aaPredicted RBP12.44□□□□□ -0.42
VPS52-218ENST00000482399 PPP3CCP48454 512 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 ALOXE3Q9BYJ1 711 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 RAPGEFL1Q9UHV5 662 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 INTS6Q9UL03 887 aaKnown RBP12.44□□□□□ -0.42
VPS52-218ENST00000482399 ABCG2Q9UNQ0 655 aa12.44□□□□□ -0.42
VPS52-218ENST00000482399 POLR2AP24928 1970 aaKnown RBP12.43□□□□□ -0.42
VPS52-218ENST00000482399 MYADML2A6NDP7 307 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 E2F3O00716 465 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 IDH3BO43837 385 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 SLC11A2P49281 568 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 DEFA1P59665 94 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 DEFA3P59666 94 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 NFKB2Q00653 900 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 IFITM3Q01628 133 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 MXD1Q05195 221 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 NFE2Q16621 373 aaPredicted RBP12.43□□□□□ -0.42
VPS52-218ENST00000482399 PHKG1Q16816 387 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 DPY19L1Q2PZI1 675 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 ZNF648Q5T619 568 aaPredicted RBP12.43□□□□□ -0.42
VPS52-218ENST00000482399 C8orf82Q6P1X6 216 aaPredicted RBP12.43□□□□□ -0.42
VPS52-218ENST00000482399 CCDC80Q76M96 950 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 TAGAPQ8N103 731 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 Q96MT0 163 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 MBOAT4Q96T53 435 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 MTERF1Q99551 399 aaKnown RBP12.43□□□□□ -0.42
VPS52-218ENST00000482399 SMAD5Q99717 465 aaKnown RBP12.43□□□□□ -0.42
VPS52-218ENST00000482399 BEX2Q9BXY8 128 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 GPN2Q9H9Y4 310 aaPredicted RBP12.43□□□□□ -0.42
VPS52-218ENST00000482399 DUSP12Q9UNI6 340 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 CACNG3O60359 315 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 SCELO95171 688 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 CPNE6O95741 557 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 RPS14P62263 151 aaKnown RBP12.43□□□□□ -0.42
VPS52-218ENST00000482399 ARMC4Q5T2S8 1044 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 UBE2UQ5VVX9 321 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 KIAA1841Q6NSI8 718 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 CEP68Q76N32 757 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 SERPINA9Q86WD7 417 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 PTRH1Q86Y79 214 aaKnown RBP12.43□□□□□ -0.42
VPS52-218ENST00000482399 SVOPLQ8N434 492 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 AMER2Q8N7J2 671 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 CD200R1Q8TD46 325 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 UBASH3BQ8TF42 649 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 MAF1Q9H063 256 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 DSN1Q9H410 356 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 AASDHPPTQ9NRN7 309 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 MYO10Q9HD67 2058 aa12.43□□□□□ -0.42
VPS52-218ENST00000482399 GNG14A0A1W2PPG7 69 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 UGT2B11O75310 529 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 HTR1AP08908 422 aa12.42□□□□□ -0.42
VPS52-218ENST00000482399 RPL17P18621 184 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms