RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ACSS2Q9NR19 701 aa11.07□□□□□ -0.64
CCM2-213ENST00000480658 CHRAC1Q9NRG0 131 aa11.07□□□□□ -0.64
CCM2-213ENST00000480658 TXLNGQ9NUQ3 528 aa11.07□□□□□ -0.64
CCM2-213ENST00000480658 INTS10Q9NVR2 710 aaKnown RBP11.07□□□□□ -0.64
CCM2-213ENST00000480658 IL1RAPL1Q9NZN1 696 aa11.07□□□□□ -0.64
CCM2-213ENST00000480658 GPN3Q9UHW5 284 aaPredicted RBP11.07□□□□□ -0.64
CCM2-213ENST00000480658 SOX13Q9UN79 622 aa11.07□□□□□ -0.64
CCM2-213ENST00000480658 PLCL2Q9UPR0 1127 aa11.07□□□□□ -0.64
CCM2-213ENST00000480658 OR51F1A6NGY5 319 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 ISM1B1AKI9 464 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 PGRMC1O00264 195 aaKnown RBP11.06□□□□□ -0.64
CCM2-213ENST00000480658 ZSCAN9O15535 394 aaPredicted RBP11.06□□□□□ -0.64
CCM2-213ENST00000480658 KIF5CO60282 957 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 OR1I1O60431 355 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 TIAF1O95411 115 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 UGT2B7P16662 529 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 ITGAXP20702 1163 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 CD9P21926 228 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 F8A1P23610 371 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 AOAHP28039 575 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 PKLRP30613 574 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 HSD17B2P37059 387 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 ARCN1P48444 511 aaKnown RBP11.06□□□□□ -0.64
CCM2-213ENST00000480658 GPS2Q13227 327 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 NCF4Q15080 339 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 TYSND1Q2T9J0 566 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 LRRC8EQ6NSJ5 796 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 RHBDD2Q6NTF9 364 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 ZNF534Q76KX8 674 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 TEX19Q8NA77 164 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 HMGCLL1Q8TB92 370 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 SKA2Q8WVK7 121 aaPredicted RBP11.06□□□□□ -0.64
CCM2-213ENST00000480658 ZUFSPQ96AP4 578 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 OR2A14Q96R47 310 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 NDC1Q9BTX1 674 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 CCDC68Q9H2F9 335 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 PCMTD2Q9NV79 361 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 IRAK4Q9NWZ3 460 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 SPATA7Q9P0W8 599 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.06□□□□□ -0.64
CCM2-213ENST00000480658 KLHL42Q9P2K6 505 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 SLC2A6Q9UGQ3 507 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 NDOR1Q9UHB4 597 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 TCFL5Q9UL49 500 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 MRPS18BQ9Y676 258 aaKnown RBP11.06□□□□□ -0.64
CCM2-213ENST00000480658 COMMD10Q9Y6G5 202 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 PRSS21Q9Y6M0 314 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 FAM169AQ9Y6X4 670 aa11.06□□□□□ -0.64
CCM2-213ENST00000480658 TARM1B6A8C7 271 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 BHMG1C9JSJ3 638 aaPredicted RBP11.05□□□□□ -0.64
CCM2-213ENST00000480658 E5RI56 91 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 RASGRF2O14827 1237 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 ZNF749O43361 778 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 ALPPP05187 535 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 PRSS56P0CW18 603 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 CCR7P32248 378 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 FNTAP49354 379 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 PGDP52209 483 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 DCDP81605 110 aaKnown RBP11.05□□□□□ -0.64
CCM2-213ENST00000480658 CCZ1BP86790 482 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 CCZ1P86791 482 aaPredicted RBP11.05□□□□□ -0.64
CCM2-213ENST00000480658 TLE1Q04724 770 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 ABRQ12979 859 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 BRD3Q15059 726 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 KYNUQ16719 465 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 CASC4Q6P4E1 433 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 CDHR3Q6ZTQ4 885 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 PCGF5Q86SE9 256 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 ATCAYQ86WG3 371 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 RASGEF1CQ8N431 466 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 ENDOVQ8N8Q3 282 aaKnown RBP11.05□□□□□ -0.64
CCM2-213ENST00000480658 MCUQ8NE86 351 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 OR2L8Q8NGY9 312 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 OR1L3Q8NH93 324 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 NAT14Q8WUY8 206 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 FER1L6-AS2Q96M78 137 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 RUNDC3BQ96NL0 473 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 P2RY12Q9H244 342 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 CHST8Q9H2A9 424 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 ENAMQ9NRM1 1142 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 NXT1Q9UKK6 140 aaKnown RBP11.05□□□□□ -0.64
CCM2-213ENST00000480658 ZNF451Q9Y4E5 1061 aa11.05□□□□□ -0.64
CCM2-213ENST00000480658 HELZ2Q9BYK8 2649 aaKnown RBP11.05□□□□□ -0.64
CCM2-213ENST00000480658 FAM237BA0A1B0GVD1 139 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 SDR42E2A6NKP2 422 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 SMAPO00193 183 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 EIF3FO00303 357 aaPredicted RBP11.04□□□□□ -0.64
CCM2-213ENST00000480658 PEX12O00623 359 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 NDC80O14777 642 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 SRPX2O60687 465 aaPredicted RBP11.04□□□□□ -0.64
CCM2-213ENST00000480658 IPO13O94829 963 aaKnown RBP11.04□□□□□ -0.64
CCM2-213ENST00000480658 TMEM63AO94886 807 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 CCNDBP1O95273 360 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 VAPBO95292 243 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 ENO3P13929 434 aaPredicted RBP11.04□□□□□ -0.64
CCM2-213ENST00000480658 ETS1P14921 441 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 GRIA1P42261 906 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 EIF3BP55884 814 aaKnown RBP11.04□□□□□ -0.64
CCM2-213ENST00000480658 GPS1Q13098 491 aa11.04□□□□□ -0.64
CCM2-213ENST00000480658 THOC5Q13769 683 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms