RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 FGF21Q9NSA1 209 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 SOHLH2Q9NX45 425 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 GRHL1Q9NZI5 618 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 WHRNQ9P202 907 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 BTRCQ9Y297 605 aa15.09■□□□□ 0.01
HMGA1-206ENST00000478214 TMEM184BQ9Y519 407 aaPredicted RBP15.09■□□□□ 0.01
HMGA1-206ENST00000478214 TEX51A0A1B0GUA7 166 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 KRT87PA6NCN2 255 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 E7ESA3 106 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 NDC80O14777 642 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 KDM1AO60341 852 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 SPAG6O75602 509 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 TIAF1O95411 115 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 DLGAP3O95886 979 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 UGT2B7P16662 529 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 ATP5DP30049 168 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 PEBP1P30086 187 aaKnown RBP15.08■□□□□ 0
HMGA1-206ENST00000478214 BDKRB1P46663 353 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 ATP1A2P50993 1020 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 RAB28P51157 221 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 ACY1Q03154 408 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 CKAP4Q07065 602 aaKnown RBP15.08■□□□□ 0
HMGA1-206ENST00000478214 VAC14Q08AM6 782 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 CALCOCO2Q13137 446 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 GPR19Q15760 415 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 KLHL38Q2WGJ6 581 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 CCDC81Q6ZN84 652 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 PPP1R3BQ86XI6 285 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 RASGRP3Q8IV61 690 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 CNTN4Q8IWV2 1026 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 CACNA2D3Q8IZS8 1091 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 C2orf73Q8N5S3 287 aaPredicted RBP15.08■□□□□ 0
HMGA1-206ENST00000478214 LINC01555Q8NAE3 123 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 FBXO36Q8NEA4 188 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 FLVCR1-AS1Q8TAF5 88 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 KCNJ9Q92806 393 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 FOPNLQ96NB1 174 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 TRAPPC9Q96Q05 1148 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 OR2A14Q96R47 310 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 ULBP3Q9BZM4 244 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 TWSG1Q9GZX9 223 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 PDE7BQ9NP56 450 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 PPANQ9NQ55 473 aaKnown RBP15.08■□□□□ 0
HMGA1-206ENST00000478214 RARRES3Q9UL19 164 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 MGAQ8IWI9 3026 aa15.08■□□□□ 0
HMGA1-206ENST00000478214 ISM1B1AKI9 464 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 K7ENP7 123 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 KIAA0754O94854 1291 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 MATN4O95460 622 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 AHSGP02765 367 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 WT1P19544 449 aaPredicted RBP15.07■□□□□ 0
HMGA1-206ENST00000478214 CD9P21926 228 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 TUBB4BP68371 445 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 CUL1Q13616 776 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 TUBB2AQ13885 445 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.07■□□□□ 0
HMGA1-206ENST00000478214 TMTC4Q5T4D3 741 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 TEDDM1Q5T9Z0 273 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 TTC23LQ6PF05 361 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 INO80CQ6PI98 192 aaPredicted RBP15.07■□□□□ 0
HMGA1-206ENST00000478214 KIAA0408Q6ZU52 694 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 GPR155Q7Z3F1 870 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 NLGN4XQ8N0W4 816 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 IL22RA1Q8N6P7 574 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 NLGN4YQ8NFZ3 816 aaPredicted RBP15.07■□□□□ 0
HMGA1-206ENST00000478214 GABPB2Q8TAK5 448 aaPredicted RBP15.07■□□□□ 0
HMGA1-206ENST00000478214 RAD51AP1Q96B01 352 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 NDNQ99608 321 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 GPR21Q99679 349 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 TUBB2BQ9BVA1 445 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 KLHL42Q9P2K6 505 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 LNPEPQ9UIQ6 1025 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 SLC39A10Q9ULF5 831 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 DHRS7Q9Y394 339 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 UTP11Q9Y3A2 253 aaKnown RBP15.07■□□□□ 0
HMGA1-206ENST00000478214 COMMD10Q9Y6G5 202 aa15.07■□□□□ 0
HMGA1-206ENST00000478214 RASGRF2O14827 1237 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 MAP4P27816 1152 aaKnown RBP15.06■□□□□ 0
HMGA1-206ENST00000478214 TIAL1Q01085 375 aaKnown RBP eCLIP15.06■□□□□ 0
HMGA1-206ENST00000478214 CBLBQ13191 982 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 KIR2DS3Q14952 304 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 TRADDQ15628 312 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 ZIC1Q15915 447 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 WHAMMP3Q1A5X7 153 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 TTLL9Q3SXZ7 439 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 RBM20Q5T481 1227 aaKnown RBP15.06■□□□□ 0
HMGA1-206ENST00000478214 PWWP2BQ6NUJ5 590 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 CYB5D1Q6P9G0 228 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 TAX1BP1Q86VP1 789 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 FAM20CQ8IXL6 584 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 ZBED8Q8IZ13 594 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 GALNT6Q8NCL4 622 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 OR2L8Q8NGY9 312 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 CD200R1Q8TD46 325 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 INPP5DQ92835 1189 aa15.06■□□□□ 0
HMGA1-206ENST00000478214 ZNF501Q96CX3 271 aaPredicted RBP15.06■□□□□ 0
HMGA1-206ENST00000478214 LOC400499M0QZD8 3231 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 A0A0J9YY10 115 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 LOC101059948A0A1B0GTJ6 334 aa15.05■□□□□ -0
HMGA1-206ENST00000478214 ARHGEF33A8MVX0 844 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms