RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CFAP52Q8N1V2 620 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 STK40Q8N2I9 435 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 GALNT4Q8N4A0 578 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 TTC30BQ8N4P2 665 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 OXR1Q8N573 874 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 MFSD2AQ8NA29 543 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 FAM156AQ8NDB6 213 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 LPCAT1Q8NF37 534 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ST13P5Q8NFI4 369 aaPredicted RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 OR4K2Q8NGD2 314 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 OR56A4Q8NGH8 313 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 OR9I1Q8NGQ6 314 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 SH3RF2Q8TEC5 729 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 TRPC4APQ8TEL6 797 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 LRTOMTQ8WZ04 291 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 SEPT8Q92599 483 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 SLCO4A1Q96BD0 722 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 TUBGCP3Q96CW5 907 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 DGCR14Q96DF8 476 aaKnown RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 MYEOVQ96EZ4 313 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 COX4I2Q96KJ9 171 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 CNBD2Q96M20 576 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 C3orf30Q96M34 536 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 PRICKLE1Q96MT3 831 aaPredicted RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 CASD1Q96PB1 797 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 GPR21Q99679 349 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 C19orf43Q9BQ61 176 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 TTPALQ9BTX7 342 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ADGRE3Q9BY15 652 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 TRIM54Q9BYV2 358 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 NACA2Q9H009 215 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 PCDHAC1Q9H158 963 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 COQ10BQ9H8M1 238 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 FBRSL1Q9HCM7 1045 aaKnown RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 STARD7Q9NQZ5 370 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 SDR39U1Q9NRG7 319 aaPredicted RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 CCM2LQ9NUG4 571 aaPredicted RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 RIC8BQ9NVN3 520 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 AIG1Q9NVV5 245 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 UBAP1Q9NZ09 502 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 PTTG2Q9NZH5 202 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 NUDT4Q9NZJ9 180 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 TRPM5Q9NZQ8 1165 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ZIM2Q9NZV7 527 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 ACTR3BQ9P1U1 418 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 HSFX1Q9UBD0 423 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 MTRRQ9UBK8 725 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 POLG2Q9UHN1 485 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 LEF1Q9UJU2 399 aaPredicted RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 AGO1Q9UL18 857 aaKnown RBP4.86□□□□□ -1.63
SF3B6-202ENST00000478050 LZTS1Q9Y250 596 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 PCDHB1Q9Y5F3 818 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 SPO11Q9Y5K1 396 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 RAI2Q9Y5P3 530 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 DNAJC15Q9Y5T4 150 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 GPR45Q9Y5Y3 372 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 BACE2Q9Y5Z0 518 aa4.86□□□□□ -1.63
SF3B6-202ENST00000478050 CFAP47Q6ZTR5 3102 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 A0A0D9SEW6 157 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 TEX51A0A1B0GUA7 166 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 MYOCOSA0A1B0GUC4 107 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 A0A1W2PP18 115 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 A0A1W2PQ45 241 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 A0A1W2PQY0 241 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 DHRS12A0PJE2 317 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ARHGAP10A1A4S6 786 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 FAM234BA2RU67 622 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 EME2A4GXA9 379 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ZNF840PA6NDX5 716 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 NPEPPSL1A6NEC2 478 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 LRRC14BA6NHZ5 514 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ANKRD66B4E2M5 251 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 E5RI56 91 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 FXYD1O00168 92 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ARVCFO00192 962 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 CDC7O00311 574 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 GFRA2O00451 464 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 IFRD1O00458 451 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 BTN3A1O00481 513 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 NME4O00746 187 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 HTRA2O43464 458 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 AKAP10O43572 662 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 EEDO75530 441 aaKnown RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 GJB3O75712 270 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 STC2O76061 302 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 GJB5O95377 273 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PGM3O95394 542 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 MT-CO1P00395 513 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 NPPAP01160 153 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PRLP01236 227 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 ESR1P03372 595 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 S100BP04271 92 aaPredicted RBP4.85□□□□□ -1.63
SF3B6-202ENST00000478050 CYBBP04839 570 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 TFAP2AP05549 437 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 GALTP07902 379 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 LINC00032P0C843 101 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PIRTP0C851 137 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 PRSS56P0CW18 603 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 UMPSP11172 480 aa4.85□□□□□ -1.63
SF3B6-202ENST00000478050 HGFP14210 728 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms