RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 PAPD7Q5XG87 772 aaKnown RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 BRAT1Q6PJG6 821 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 SLFN11Q7Z7L1 901 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 TRIM74Q86UV6 250 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 VRK3Q8IV63 474 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 LILRB2Q8N423 598 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 OR4D9Q8NGE8 314 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 C9orf43Q8TAL5 461 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 CPT1CQ8TCG5 803 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 SLC37A2Q8TED4 501 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 CASKIN2Q8WXE0 1202 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 DTD2Q96FN9 168 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 CCDC34Q96HJ3 373 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 C16orf92Q96LL3 132 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 ZNF641Q96N77 438 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 PEBP4Q96S96 227 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 DDA1Q9BW61 102 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 TRIM7Q9C029 511 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 NDST4Q9H3R1 872 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 SAMSN1Q9NSI8 373 aaKnown RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 ETNK2Q9NVF9 386 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 SIDT1Q9NXL6 827 aaKnown RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 UBA2Q9UBT2 640 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 PLEKHB1Q9UF11 243 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 MOSPD1Q9UJG1 213 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 HPCAL4Q9UM19 191 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 TMEM98Q9Y2Y6 226 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 TMEM184BQ9Y519 407 aaPredicted RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 ATP6V1DQ9Y5K8 247 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 TNPO3Q9Y5L0 923 aaKnown RBP4.53□□□□□ -1.68
CKS1B-207ENST00000477676 CACNA1CQ13936 2221 aa4.53□□□□□ -1.68
CKS1B-207ENST00000477676 A6NCN8 305 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 GOLGA6L4A6NEF3 574 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 NPIPB15A6NHN6 443 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 SIGLEC16A6NMB1 481 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 ZAR1LA6NP61 321 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 RHPN2P1A8MT19 583 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 A8MU76 341 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 CREB3O43889 395 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 DNAJB5O75953 348 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 STK17BO94768 372 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 HEXIM1O94992 359 aaKnown RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 SCAF4O95104 1147 aaKnown RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 S100BP04271 92 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 IVLP07476 585 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 KRT3P12035 628 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 GPD1P21695 349 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 GNLYP22749 145 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 XPAP23025 273 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 CSTF2P33240 577 aaKnown RBP eCLIP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 FASLGP48023 281 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 GYS2P54840 703 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 CDR2Q01850 454 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 SLC10A7Q0GE19 358 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 TRAF2Q12933 501 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 ACOX1Q15067 660 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 CAMK4Q16566 473 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 CLPPQ16740 277 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 LACTB2Q53H82 288 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 PYCR3Q53H96 274 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 TM4SF20Q53R12 229 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 FAM182AQ5T1J6 154 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 CAPRIN2Q6IMN6 1127 aaKnown RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 ERAP2Q6P179 960 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 SCYL2Q6P3W7 929 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 TMEM71Q6P5X7 295 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 DOK6Q6PKX4 331 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 Q6ZVL8 140 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 MON1BQ7L1V2 547 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 TECPR1Q7Z6L1 1165 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 ZNF354CQ86Y25 554 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 SFRP1Q8N474 314 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 NLGN4YQ8NFZ3 816 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 ATL2Q8NHH9 583 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 KIAA1524Q8TCG1 905 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 STARD8Q92502 1023 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 SCAMP4Q969E2 229 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 NUS1Q96E22 293 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 CATSPER2Q96P56 530 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 WDR24Q96S15 920 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 RUFY1Q96T51 708 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 NCAPGQ9BPX3 1015 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 CPPED1Q9BRF8 314 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 TUBGCP2Q9BSJ2 902 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 TBC1D10AQ9BXI6 508 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 STK33Q9BYT3 514 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 ABCG8Q9H221 673 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 VPS16Q9H269 839 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 PDCL3Q9H2J4 239 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 TOR3AQ9H497 397 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 ATP13A3Q9H7F0 1226 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 AKIRIN1Q9H9L7 192 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 GPN2Q9H9Y4 310 aaPredicted RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 FBXO8Q9NRD0 319 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 TRNAU1APQ9NX07 287 aaKnown RBP4.52□□□□□ -1.69
CKS1B-207ENST00000477676 OGFRQ9NZT2 677 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 TRPS1Q9UHF7 1281 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 CD84Q9UIB8 345 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 SLC17A4Q9Y2C5 497 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms