RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 TSR3Q9UJK0 312 aaKnown RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 POMT2Q9UKY4 750 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 ICKQ9UPZ9 632 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 CRYL1Q9Y2S2 319 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 TMEM184BQ9Y519 407 aaPredicted RBP8.03□□□□□ -1.12
HDAC6-221ENST00000477561 PCDHGA4Q9Y5G9 962 aa8.03□□□□□ -1.12
HDAC6-221ENST00000477561 SDR42E2A6NKP2 422 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 F8W8V4 182 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 ERVH48-1M5A8F1 160 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 TP73O15350 636 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 NKX2-8O15522 239 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 NIPSNAP2O75323 286 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 BANF1O75531 89 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 ZBTB11O95625 1053 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-221ENST00000477561 DLGAP3O95886 979 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 NTRK1P04629 796 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 FGF5P12034 268 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 ST6GAL1P15907 406 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 MAP4P27816 1152 aaKnown RBP8.02□□□□□ -1.13
HDAC6-221ENST00000477561 AOAHP28039 575 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 HSD17B3P37058 310 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 HSD11B2P80365 405 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 ACY1Q03154 408 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 COL9A2Q14055 689 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-221ENST00000477561 IL11RAQ14626 422 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 HIF1AQ16665 826 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 ANKRD20A4Q4UJ75 823 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 HSP90B2PQ58FF3 399 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 ZNF789Q5FWF6 425 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 CTSL3PQ5NE16 218 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 KIAA0930Q6ICG6 404 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-221ENST00000477561 MRNIPQ6NTE8 343 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 PWWP2BQ6NUJ5 590 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 C6orf15Q6UXA7 325 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-221ENST00000477561 LRIG3Q6UXM1 1119 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 UNC5AQ6ZN44 842 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 CROCCP2Q86T23 111 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 TRIM73Q86UV7 250 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 PPP1R3BQ86XI6 285 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 SLC22A15Q8IZD6 547 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 ADGRF3Q8IZF5 1079 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 AGGF1Q8N302 714 aaeCLIP8.02□□□□□ -1.13
HDAC6-221ENST00000477561 C2orf73Q8N5S3 287 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-221ENST00000477561 GOLGA6L1Q8N7Z2 621 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 OR5K2Q8NHB8 316 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 SKA2Q8WVK7 121 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-221ENST00000477561 ASZ1Q8WWH4 475 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 TTC9Q92623 222 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 STAMBPL1Q96FJ0 436 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 CD180Q99467 661 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 TSSK1BQ9BXA7 367 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 TXLNGYQ9BZA5 131 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 SEMA4CQ9C0C4 833 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 GPN2Q9H9Y4 310 aaPredicted RBP8.02□□□□□ -1.13
HDAC6-221ENST00000477561 XAB2Q9HCS7 855 aaKnown RBP8.02□□□□□ -1.13
HDAC6-221ENST00000477561 PDE7BQ9NP56 450 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 FGF21Q9NSA1 209 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 SPHK1Q9NYA1 384 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 ACTR10Q9NZ32 417 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 GALPQ9UBC7 116 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 IL17BQ9UHF5 180 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 METRNQ9UJH8 293 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 GNPTGQ9UJJ9 305 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 RARRES3Q9UL19 164 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 RUVBL2Q9Y230 463 aaKnown RBP8.02□□□□□ -1.13
HDAC6-221ENST00000477561 CDYLQ9Y232 598 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 MRPS18BQ9Y676 258 aaKnown RBP8.02□□□□□ -1.13
HDAC6-221ENST00000477561 MAD1L1Q9Y6D9 718 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 RPS6KL1Q9Y6S9 549 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 CACNA1GO43497 2377 aa8.02□□□□□ -1.13
HDAC6-221ENST00000477561 AHCTF1Q8WYP5 2266 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 ATMQ13315 3056 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 FAM237BA0A1B0GVD1 139 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 MAGEB16A2A368 324 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 PIPSLA2A3N6 862 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 KRT87PA6NCN2 255 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 GOLGA6L10A6NI86 522 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 C2orf74A8MZ97 194 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 GPC4O75487 556 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 APOA4P06727 396 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 CHRM5P08912 532 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-221ENST00000477561 PRKAR1AP10644 381 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 MLNP12872 115 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 PAMP19021 973 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 CHRM3P20309 590 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 RPS3P23396 243 aaKnown RBP eCLIP8.01□□□□□ -1.13
HDAC6-221ENST00000477561 F8A1P23610 371 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 DLSTP36957 453 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 MAGEA4P43358 317 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 PLOD1Q02809 727 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-221ENST00000477561 IFFO1Q0D2I5 559 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 ABHD18Q0P651 414 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 CBLBQ13191 982 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 CTBP1Q13363 440 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 THOC5Q13769 683 aaKnown RBP8.01□□□□□ -1.13
HDAC6-221ENST00000477561 TMED2Q15363 201 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 TBR1Q16650 682 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 LINC00303Q3SY05 128 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.01□□□□□ -1.13
HDAC6-221ENST00000477561 TMTC4Q5T4D3 741 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms