RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 IGLV9-49A0A0B4J1Y8 123 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 LOC101059948A0A1B0GTJ6 334 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 A0A1W2PN81 502 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 ATP6V0E1O15342 81 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 PRKRAO75569 313 aaKnown RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 PIGNO95427 931 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 NGFP01138 241 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 AMBPP02760 352 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 CFC1BP0CG36 223 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 CFC1P0CG37 223 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 PRSS56P0CW18 603 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 SMIM18P0DKX4 95 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 HAPLN1P10915 354 aaPredicted RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 HSPA8P11142 646 aaKnown RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 EFNA1P20827 205 aaPredicted RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 MPZP25189 248 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 AZGP1P25311 298 aaKnown RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 ITGA3P26006 1051 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 CHRNB4P30926 498 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 HOXC8P31273 242 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 CEACAM8P31997 349 aaPredicted RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 MAP2K2P36507 400 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 CHRNA7P36544 502 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 MNDAP41218 407 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 B3GALT5-AS1P59052 145 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 TUBB4BP68371 445 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 PRKCZQ05513 592 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 ZNF415Q09FC8 603 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 CAMK2DQ13557 499 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 PTPRCAPQ14761 206 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 UGP2Q16851 508 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 KIAA1644Q3SXP7 199 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 KRBOX4Q5JUW0 171 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 OTUD3Q5T2D3 398 aaPredicted RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 C11orf63Q6NUN7 778 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 MFSD12Q6NUT3 480 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 RBPMS2Q6ZRY4 209 aaKnown RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 DET1Q7L5Y6 550 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 NUP54Q7Z3B4 507 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 TMEM139Q8IV31 216 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 APLFQ8IW19 511 aaPredicted RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 MRPS27Q92552 414 aaKnown RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 VPS33AQ96AX1 596 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 MOB3AQ96BX8 217 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 DHX58Q96C10 678 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 HDAC11Q96DB2 347 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 RMDN1Q96DB5 314 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 THOC1Q96FV9 657 aaKnown RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 URM1Q9BTM9 101 aaKnown RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 KRTAP2-2Q9BYT5 123 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 ANKRD2Q9GZV1 360 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 ZNF696Q9H7X3 374 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 SCRT2Q9NQ03 307 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 CCDC177Q9NQR7 707 aaPredicted RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 INTS10Q9NVR2 710 aaKnown RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 DDX43Q9NXZ2 648 aaKnown RBP3.03□□□□□ -1.92
TARDBP-208ENST00000477447 C5AR2Q9P296 337 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 LRWD1Q9UFC0 647 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 TMED3Q9Y3Q3 217 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 RPS6KL1Q9Y6S9 549 aa3.03□□□□□ -1.92
TARDBP-208ENST00000477447 SMCHD1A6NHR9 2005 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 IGHV4-61A0A0C4DH41 118 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 NEMP2A6NFY4 417 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 ANKRD61A6NGH8 418 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 KRT86O43790 486 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 SOCS5O75159 536 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 TRMUO75648 421 aaKnown RBP3.02□□□□□ -1.93
TARDBP-208ENST00000477447 CELF2O95319 508 aaKnown RBP3.02□□□□□ -1.93
TARDBP-208ENST00000477447 ACSL3O95573 720 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 CLPTM1O96005 669 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 IGHV4-59P01825 116 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 CD48P09326 243 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 FRMD6-AS1P0C7T7 363 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 CYP11B2P19099 503 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 EEF1DP29692 281 aaKnown RBP3.02□□□□□ -1.93
TARDBP-208ENST00000477447 GLIPR1P48060 266 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 MAT1AQ00266 395 aaKnown RBP3.02□□□□□ -1.93
TARDBP-208ENST00000477447 KRT81Q14533 505 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 RRS1Q15050 365 aaKnown RBP3.02□□□□□ -1.93
TARDBP-208ENST00000477447 P2RY6Q15077 328 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 CA9Q16790 459 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 ODF4Q2M2E3 257 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 ITPRIPL2Q3MIP1 535 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 SYT14P1Q58G82 188 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 SPDYCQ5MJ68 293 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 CST9LP1Q5W188 147 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 ARHGAP17Q68EM7 881 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 PRR27Q6MZM9 219 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 FAM53AQ6NSI3 398 aaPredicted RBP3.02□□□□□ -1.93
TARDBP-208ENST00000477447 ARHGAP11AQ6P4F7 1023 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 ZNF449Q6P9G9 518 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 FAM198BQ6UWH4 519 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 SLC16A9Q7RTY1 509 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 RTN4RL2Q86UN3 420 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 NME8Q8N427 588 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 PI4KAP1Q8N8J0 262 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 FAM76AQ8TAV0 307 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 SNRNP27Q8WVK2 155 aaKnown RBP3.02□□□□□ -1.93
TARDBP-208ENST00000477447 NR4A3Q92570 626 aa3.02□□□□□ -1.93
TARDBP-208ENST00000477447 CFAP57Q96MR6 1250 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms