RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 CASS4Q9NQ75 786 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 GPR83Q9NYM4 423 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 ZNF451Q9Y4E5 1061 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 CAPN6Q9Y6Q1 641 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 ICE1Q9Y2F5 2266 aa11.25□□□□□ -0.61
VARS2-208ENST00000477052 A0A0J9YY10 115 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 LIN7AO14910 233 aaPredicted RBP11.24□□□□□ -0.61
VARS2-208ENST00000477052 IFNB1P01574 187 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 FTH1P02794 183 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 MSL3P1P0C860 447 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 ZSCAN5DPP0CG00 497 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 AGXTP21549 392 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 MCM3P25205 808 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 CCR7P32248 378 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 SHMT2P34897 504 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 HSPA14Q0VDF9 509 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 PLEKHN1Q494U1 663 aaPredicted RBP11.24□□□□□ -0.61
VARS2-208ENST00000477052 TSTD2Q5T7W7 516 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 FHL5Q5TD97 284 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 PPP1R21Q6ZMI0 780 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 MED25Q71SY5 747 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 ZNF534Q76KX8 674 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 TBC1D21Q8IYX1 336 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 DNAJC22Q8N4W6 341 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 DTWD1Q8N5C7 304 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 LINC01555Q8NAE3 123 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 TTC13Q8NBP0 860 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 SPC24Q8NBT2 197 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 OR6P1Q8NGX9 317 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 OR5K2Q8NHB8 316 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.24□□□□□ -0.61
VARS2-208ENST00000477052 TCTN2Q96GX1 697 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 SGSM3Q96HU1 749 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 GBP5Q96PP8 586 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 BAG1Q99933 345 aaPredicted RBP11.24□□□□□ -0.61
VARS2-208ENST00000477052 ZBTB20Q9HC78 741 aaPredicted RBP11.24□□□□□ -0.61
VARS2-208ENST00000477052 SYTL2Q9HCH5 934 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 SLAMF7Q9NQ25 335 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 SLC22A11Q9NSA0 550 aa11.24□□□□□ -0.61
VARS2-208ENST00000477052 MARCH4Q9P2E8 410 aaPredicted RBP11.24□□□□□ -0.61
VARS2-208ENST00000477052 IFT80Q9P2H3 777 aaPredicted RBP11.24□□□□□ -0.61
VARS2-208ENST00000477052 GPN3Q9UHW5 284 aaPredicted RBP11.24□□□□□ -0.61
VARS2-208ENST00000477052 TSR3Q9UJK0 312 aaKnown RBP11.24□□□□□ -0.61
VARS2-208ENST00000477052 ZSCAN9O15535 394 aaPredicted RBP11.23□□□□□ -0.61
VARS2-208ENST00000477052 LIASO43766 372 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 DPM1O60762 260 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 UMODP07911 640 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 OR56A5P0C7T3 313 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 ITGAXP20702 1163 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 MAGP20916 626 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 ALAS2P22557 587 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 PSMA3P25788 255 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 PKLRP30613 574 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 FOLR3P41439 243 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 CRADDP78560 199 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 DCDP81605 110 aaKnown RBP11.23□□□□□ -0.61
VARS2-208ENST00000477052 ITIH4Q14624 930 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 P3H1Q32P28 736 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 NKAIN1Q4KMZ8 207 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 PACS1Q6VY07 963 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 SHISA6Q6ZSJ9 500 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 PPP1R32Q7Z5V6 425 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 RAB43Q86YS6 212 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 CISD2Q8N5K1 135 aaKnown RBP11.23□□□□□ -0.61
VARS2-208ENST00000477052 METTL27Q8N6F8 245 aaPredicted RBP11.23□□□□□ -0.61
VARS2-208ENST00000477052 TMEM102Q8N9M5 508 aaPredicted RBP11.23□□□□□ -0.61
VARS2-208ENST00000477052 PRR7Q8TB68 274 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 C19orf43Q9BQ61 176 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 MESP1Q9BRJ9 268 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 TXLNGQ9NUQ3 528 aa11.23□□□□□ -0.61
VARS2-208ENST00000477052 STOX2Q9P2F5 926 aaPredicted RBP11.23□□□□□ -0.61
VARS2-208ENST00000477052 PLEKHB1Q9UF11 243 aaPredicted RBP11.23□□□□□ -0.61
VARS2-208ENST00000477052 RUVBL2Q9Y230 463 aaKnown RBP11.23□□□□□ -0.61
VARS2-208ENST00000477052 SPTBN1Q01082 2364 aaKnown RBP11.23□□□□□ -0.61
VARS2-208ENST00000477052 MIF4GDA9UHW6 222 aaKnown RBP11.22□□□□□ -0.61
VARS2-208ENST00000477052 PSMD3O43242 534 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 NRP2O60462 931 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 HBQ1P09105 142 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 COL8A1P27658 744 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 TERF1P54274 439 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 RRADP55042 308 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 KIF5AQ12840 1032 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 CDH17Q12864 832 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 GRB7Q14451 532 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 ESPL1Q14674 2120 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 NR6A1Q15406 480 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 OASLQ15646 514 aaKnown RBP11.22□□□□□ -0.61
VARS2-208ENST00000477052 CCSMST1Q4G0I0 132 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 RHBDD2Q6NTF9 364 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 AFTPHQ6ULP2 937 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 TTLL10Q6ZVT0 673 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 LINC00523Q86TU6 105 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 OR4L1Q8NH43 312 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 INPP5DQ92835 1189 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.22□□□□□ -0.61
VARS2-208ENST00000477052 SNRNP40Q96DI7 357 aaKnown RBP11.22□□□□□ -0.61
VARS2-208ENST00000477052 HES6Q96HZ4 224 aa11.22□□□□□ -0.61
VARS2-208ENST00000477052 CALR3Q96L12 384 aaKnown RBP11.22□□□□□ -0.61
VARS2-208ENST00000477052 SMAD5Q99717 465 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms