RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ARG2P78540 354 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 XIAPP98170 497 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 NFKBIBQ15653 356 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 SLC5A12Q1EHB4 618 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 TUBB8Q3ZCM7 444 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 FIGNQ5HY92 759 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 MTFR2Q6P444 385 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 TMEM207Q6UWW9 146 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 COX15Q7KZN9 410 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 IPMKQ8NFU5 416 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 OR4K2Q8NGD2 314 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 TFGQ92734 400 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-213ENST00000476777 SYN2Q92777 582 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-213ENST00000476777 NAP1L5Q96NT1 182 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-213ENST00000476777 FCRL5Q96RD9 977 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 MESP1Q9BRJ9 268 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 MRM3Q9HC36 420 aaKnown RBP10.92□□□□□ -0.66
BRCA1-213ENST00000476777 UVRAGQ9P2Y5 699 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 NENFQ9UMX5 172 aa10.92□□□□□ -0.66
BRCA1-213ENST00000476777 INTS1Q8N201 2190 aaKnown RBP10.92□□□□□ -0.66
BRCA1-213ENST00000476777 FBN3Q75N90 2809 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 ZNF469Q96JG9 3925 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-213ENST00000476777 A0A0J9YY10 115 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 A0A1B0GTH6 734 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 A0A1B0GX78 115 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 KCNN4O15554 427 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 PRICKLE3O43900 615 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-213ENST00000476777 UNC5CO95185 931 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 SERPING1P05155 500 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 TPBGLP0DKB5 382 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 SHMT2P34897 504 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 CA7P43166 264 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 RPA4Q13156 261 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 MPP3Q13368 585 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 TAF1AQ15573 450 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-213ENST00000476777 INAQ16352 499 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 RBBP7Q16576 425 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.91□□□□□ -0.66
BRCA1-213ENST00000476777 FILIP1LQ4L180 1135 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 XKRXQ6PP77 449 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 SHISA6Q6ZSJ9 500 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 TTLL10Q6ZVT0 673 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 RFX6Q8HWS3 928 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 OR5AR1Q8NGP9 310 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 CPLX3Q8WVH0 158 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 TFB1MQ8WVM0 346 aaKnown RBP10.91□□□□□ -0.66
BRCA1-213ENST00000476777 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-213ENST00000476777 DLG3Q92796 817 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 ULK4Q96C45 1275 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 COPS8Q99627 209 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 SOX17Q9H6I2 414 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-213ENST00000476777 SEMA3GQ9NS98 782 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 LMBRD1Q9NUN5 540 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 EURLQ9NYK6 297 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 CHMP5Q9NZZ3 219 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 SAE1Q9UBE0 346 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-213ENST00000476777 CTSFQ9UBX1 484 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 LCMT1Q9UIC8 334 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 CRLS1Q9UJA2 301 aa10.91□□□□□ -0.66
BRCA1-213ENST00000476777 PRRC2AP48634 2157 aaKnown RBP10.9□□□□□ -0.66
BRCA1-213ENST00000476777 TRAV17A0A0B4J275 112 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 VSTM2BA6NLU5 285 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 C2orf81A6NN90 581 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 CFAP99D6REC4 459 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 C19orf84I3L1E1 186 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 AGTP01019 485 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 PIM1P11309 404 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-213ENST00000476777 CAPN3P20807 821 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 MST1P26927 711 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 SOX11P35716 441 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 PBX1P40424 430 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 NR2C2P49116 596 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 TNFSF10P50591 281 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 ARSFP54793 590 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 FAM20CQ8IXL6 584 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 ZNF567Q8N184 647 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 HEXDCQ8WVB3 486 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 VPS50Q96JG6 964 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 FSD1LQ9BXM9 530 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 FAM96AQ9H5X1 160 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 PLA2G3Q9NZ20 509 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 OR6C2Q9NZP2 312 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 ABI3Q9P2A4 366 aa10.9□□□□□ -0.66
BRCA1-213ENST00000476777 KLHL8Q9P2G9 620 aaPredicted RBP10.9□□□□□ -0.66
BRCA1-213ENST00000476777 NXT1Q9UKK6 140 aaKnown RBP10.9□□□□□ -0.66
BRCA1-213ENST00000476777 JMJD1CQ15652 2540 aa10.9□□□□□ -0.67
BRCA1-213ENST00000476777 FLNAP21333 2647 aaKnown RBP10.89□□□□□ -0.67
BRCA1-213ENST00000476777 IGLV3-16A0A075B6K0 115 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 DYTNA2CJ06 578 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 C5orf60A6NFR6 353 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 DSCR3O14972 297 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 DIAPH2O60879 1101 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 USP1O94782 785 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 HPP00738 406 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 H2AFZP0C0S5 128 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 PECAM1P16284 738 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-213ENST00000476777 AGAP20933 346 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 ACADLP28330 430 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 PEBP1P30086 187 aaKnown RBP10.89□□□□□ -0.67
BRCA1-213ENST00000476777 KIR3DL1P43629 444 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms