RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 SEMA3AQ14563 771 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 INPP5JQ15735 1006 aaPredicted RBP11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 KYNUQ16719 465 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 CRB2Q5IJ48 1285 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 TSTD2Q5T7W7 516 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 LYPLAL1Q5VWZ2 237 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 IGFL3Q6UXB1 125 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 VRK3Q8IV63 474 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 TMEM151BQ8IW70 566 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 SLC22A15Q8IZD6 547 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 LINC01555Q8NAE3 123 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 PROKR1Q8TCW9 393 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 UBE2Q2Q8WVN8 375 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 IP6K3Q96PC2 410 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 BAG1Q99933 345 aaPredicted RBP11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 CARD6Q9BX69 1037 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 CASS4Q9NQ75 786 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 SLC22A11Q9NSA0 550 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 C5AR2Q9P296 337 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 CAPN6Q9Y6Q1 641 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 HEATR5BQ9P2D3 2071 aa11.81□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 CENPEQ02224 2701 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 CACNA1DQ01668 2161 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 CCDC78A2IDD5 438 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 HEATR9A2RTY3 570 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 BLACEA4D250 179 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 ZNF185O15231 689 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 PRICKLE3O43900 615 aaPredicted RBP11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 DPM1O60762 260 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 OR2B3O76000 313 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 SLCO2B1O94956 709 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 UMODP07911 640 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 ITGAXP20702 1163 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 AGXTP21549 392 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 GNLYP22749 145 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 ADRA1DP25100 572 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 PKLRP30613 574 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 FDFT1P37268 417 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 RRADP55042 308 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 DCDP81605 110 aaKnown RBP11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 KIF5AQ12840 1032 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 KIR2DS3Q14952 304 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 BRD3Q15059 726 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 SLC6A19Q695T7 634 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 TLDC1Q6P9B6 456 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 MRGPREQ86SM8 312 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 KIAA1328Q86T90 577 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 GAS2L3Q86XJ1 694 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 GPR135Q8IZ08 494 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 RNF10Q8N5U6 811 aaKnown RBP11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 OR2Y1Q8NGV0 311 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 OR4L1Q8NH43 312 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 ATG4AQ8WYN0 398 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 PNPLA2Q96AD5 504 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 ZNF285Q96NJ3 590 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 BARD1Q99728 777 aaKnown RBP11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 C17orf62Q9BQA9 187 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 FRMD8P1Q9BZ68 369 aaPredicted RBP11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 GPR83Q9NYM4 423 aa11.8□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 C9J4A7 227 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 ZSCAN9O15535 394 aaPredicted RBP11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 VPS4BO75351 444 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 CD63P08962 238 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 AOAHP28039 575 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 RAB28P51157 221 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 SIX1Q15475 284 aaPredicted RBP11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 DEFB110Q30KQ9 67 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 PRR30Q53SZ7 412 aaPredicted RBP11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 DNAJC21Q5F1R6 531 aaKnown RBP11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 DCAF10Q5QP82 559 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 AFTPHQ6ULP2 937 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 NLRP9Q7RTR0 991 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 RAB43Q86YS6 212 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 SLC13A5Q86YT5 568 aaPredicted RBP11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 TAB3Q8N5C8 712 aaPredicted RBP11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 LKAAEAR1Q8TD35 194 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 NACC2Q96BF6 587 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 ALS2CR12Q96Q35 445 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 DESI2Q9BSY9 194 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 ZNF552Q9H707 407 aaPredicted RBP11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 EURLQ9NYK6 297 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 DHCR7Q9UBM7 475 aaKnown RBP11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 PLAGL1Q9UM63 463 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 VPS4AQ9UN37 437 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 SRPK3Q9UPE1 567 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 PLCL2Q9UPR0 1127 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 PADI2Q9Y2J8 665 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 TDRKHQ9Y2W6 561 aaKnown RBP11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 TCAF1Q9Y4C2 921 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 KLK4Q9Y5K2 254 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 CRYBG3Q68DQ2 2970 aa11.79□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 WIPF3A6NGB9 483 aa11.78□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 A6NL46 340 aa11.78□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 TCP11X1B4DZS4 312 aa11.78□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 SEMA7AO75326 666 aa11.78□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 ETS1P14921 441 aa11.78□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 CD9P21926 228 aa11.78□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 MYBPC3Q14896 1274 aa11.78□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 PLEKHN1Q494U1 663 aaPredicted RBP11.78□□□□□ -0.52
MSH5-SAPCD1-205ENST00000476085 NKAIN1Q4KMZ8 207 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms