RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 PNPLA1Q8N8W4 532 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 SNX31Q8N9S9 440 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 CHDHQ8NE62 594 aaPredicted RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 ZNF548Q8NEK5 533 aaPredicted RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 DNAJB8Q8NHS0 232 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 UBTD2Q8WUN7 234 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 CHAC2Q8WUX2 184 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 GTF2H4Q92759 462 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 KCNJ9Q92806 393 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 PSMG2Q969U7 264 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 NXPE3Q969Y0 559 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 CEP295NLQ96MC4 621 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 KCNA7Q96RP8 456 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 ZNF347Q96SE7 839 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 MBOAT4Q96T53 435 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 INSM2Q96T92 566 aaPredicted RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 CGREF1Q99674 301 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 AMBRA1Q9C0C7 1298 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 POLR1EQ9GZS1 481 aaKnown RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 NAA50Q9GZZ1 169 aaKnown RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 SIK2Q9H0K1 926 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 DUSP21Q9H596 190 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 POLR1BQ9H9Y6 1135 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 CARS2Q9HA77 564 aaKnown RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 NT5MQ9NPB1 228 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 AKIP1Q9NQ31 210 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 PFDN4Q9NQP4 134 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 FBXO8Q9NRD0 319 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 CATSPERZQ9NTU4 200 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 INTS7Q9NVH2 962 aaKnown RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.73□□□□□ -1.33
UBR4-212ENST00000475973 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.73□□□□□ -1.33
UBR4-212ENST00000475973 MPP6Q9NZW5 540 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 CACNG4Q9UBN1 327 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 DNAJB9Q9UBS3 223 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 GIMAP2Q9UG22 337 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 TMEFF2Q9UIK5 374 aaPredicted RBP6.73□□□□□ -1.33
UBR4-212ENST00000475973 ERVW-1Q9UQF0 538 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 ZNF711Q9Y462 761 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 CORINQ9Y5Q5 1042 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 PTGDR2Q9Y5Y4 395 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 HSPE1-MOB4S4R3N1 261 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 PLXNA4Q9HCM2 1894 aa6.73□□□□□ -1.33
UBR4-212ENST00000475973 GREB1Q4ZG55 1949 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 RNF103-CHMP3A0A140T963 221 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 FAM149AA5PLN7 773 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 CCDC160A6NGH7 325 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 OR51F1A6NGY5 319 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 GFRA2O00451 464 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 INPP4BO15327 924 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 MSI1O43347 362 aaKnown RBP6.72□□□□□ -1.33
UBR4-212ENST00000475973 DEAF1O75398 565 aaPredicted RBP6.72□□□□□ -1.33
UBR4-212ENST00000475973 RFPL2O75678 378 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 SOAT2O75908 522 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 CLPXO76031 633 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 WDR47O94967 919 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 C8AP07357 584 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 ANXA6P08133 673 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 LINC00032P0C843 101 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 THRBP10828 461 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 MTHFD1P11586 935 aaKnown RBP6.72□□□□□ -1.33
UBR4-212ENST00000475973 PKMP14618 531 aaKnown RBP6.72□□□□□ -1.33
UBR4-212ENST00000475973 TSPAN8P19075 237 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 CCNA2P20248 432 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 UGT1A1P22309 533 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 UGT1A4P22310 534 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 RPS3P23396 243 aaKnown RBP eCLIP6.72□□□□□ -1.33
UBR4-212ENST00000475973 PRPH2P23942 346 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 MZF1P28698 734 aaPredicted RBP6.72□□□□□ -1.33
UBR4-212ENST00000475973 EEF1DP29692 281 aaKnown RBP6.72□□□□□ -1.33
UBR4-212ENST00000475973 AVPR2P30518 371 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 UGT1A3P35503 534 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 UGT1A5P35504 534 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 BRCC3P46736 316 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 PXNP49023 591 aaPredicted RBP6.72□□□□□ -1.33
UBR4-212ENST00000475973 CLCN7P51798 805 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 C21orf59P57076 290 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 TBX4P57082 545 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 KCNK10P57789 538 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 ERVPABLB-1P60509 514 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 PRAMEP78395 509 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 PRKG2Q13237 762 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 AQP6Q13520 282 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 NFYCQ13952 458 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 SEPT6Q14141 434 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 TAF1AQ15573 450 aaPredicted RBP6.72□□□□□ -1.33
UBR4-212ENST00000475973 TSNQ15631 228 aaKnown RBP6.72□□□□□ -1.33
UBR4-212ENST00000475973 PFKFB4Q16877 469 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 IQCCQ4KMZ1 466 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 C4orf17Q53FE4 359 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 RUNDC3AQ59EK9 446 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 CTSL3PQ5NE16 218 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 RTP2Q5QGT7 225 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 BROXQ5VW32 411 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 GPR107Q5VW38 600 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 OVOS1Q6IE37 1185 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 AFTPHQ6ULP2 937 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 PRSS55Q6UWB4 352 aaPredicted RBP6.72□□□□□ -1.33
UBR4-212ENST00000475973 ANKS3Q6ZW76 656 aa6.72□□□□□ -1.33
UBR4-212ENST00000475973 RTL10Q7L3V2 364 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms