RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 SKIV2L2P42285 1042 aaKnown RBP6.79□□□□□ -1.32
LIMD1-204ENST00000474665 MAGEA12P43365 314 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 GPR3P46089 330 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 KCNC1P48547 511 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 TMPRSS3P57727 454 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 DAB2P98082 770 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 INSM1Q01101 510 aaPredicted RBP6.79□□□□□ -1.32
LIMD1-204ENST00000474665 POU4F1Q01851 419 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 PLOD1Q02809 727 aaPredicted RBP6.79□□□□□ -1.32
LIMD1-204ENST00000474665 DLG1Q12959 904 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 TARDBPQ13148 414 aaKnown RBP eCLIP6.79□□□□□ -1.32
LIMD1-204ENST00000474665 PRKG2Q13237 762 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 SQSTM1Q13501 440 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 PHKG1Q16816 387 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 KLHL38Q2WGJ6 581 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 GRTP1Q5TC63 336 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 MROH9Q5TGP6 573 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 CDCP2Q5VXM1 449 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 EMBQ6PCB8 327 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 TMPRSS12Q86WS5 348 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 CYP4X1Q8N118 509 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 SPATA6LQ8N4H0 392 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 EXD3Q8N9H8 876 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 OR2W6PQ8NHA6 318 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 DENND1AQ8TEH3 1009 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 MZB1Q8WU39 189 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 ASB11Q8WXH4 323 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 RSC1A1Q92681 617 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 CDKL2Q92772 493 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 NAT6Q93015 286 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 ISL2Q96A47 359 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 ELMO2Q96JJ3 720 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 UBXN10Q96LJ8 280 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 CCDC3Q9BQI4 270 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 NUDT22Q9BRQ3 303 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 KIR3DX1Q9H7L2 352 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 UCK1Q9HA47 277 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 POT1Q9NUX5 634 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 NSMCE4AQ9NXX6 385 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 TAS2R13Q9NYV9 303 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 NCKIPSDQ9NZQ3 722 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 TMEM9Q9P0T7 183 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 CTNNAL1Q9UBT7 734 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 SLC24A2Q9UI40 661 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 TRMT6Q9UJA5 497 aaKnown RBP6.79□□□□□ -1.32
LIMD1-204ENST00000474665 ADAMTS6Q9UKP5 1117 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 ATXN7L1Q9ULK2 861 aaPredicted RBP6.79□□□□□ -1.32
LIMD1-204ENST00000474665 PLAGL1Q9UM63 463 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 ICKQ9UPZ9 632 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 PCDHGA1Q9Y5H4 931 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 FLNCQ14315 2725 aa6.79□□□□□ -1.32
LIMD1-204ENST00000474665 UTP20O75691 2785 aaKnown RBP6.79□□□□□ -1.32
LIMD1-204ENST00000474665 EXOC1LA0A1B0GW35 172 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 LILRA5A6NI73 299 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 RHPN2P1A8MT19 583 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 POC1B-GALNT4F8VUJ3 575 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 CDC7O00311 574 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 BTN3A3O00478 584 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 KPNA5O15131 536 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 SUV39H1O43463 412 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 RFPL1O75677 317 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 RFPL3O75679 317 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 TCEA3O75764 348 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 VIPP01282 170 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 RPLP0P05388 317 aaKnown RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 NUDT17P0C025 328 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 SLC2A4P14672 509 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 ALDH4A1P30038 563 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 PEBP1P30086 187 aaKnown RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 SPRP35270 261 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 HALP42357 657 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 BDKRB1P46663 353 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 LSSP48449 732 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 RPIAP49247 311 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 DUSP3P51452 185 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 IRF9Q00978 393 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 ILKQ13418 452 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 USP10Q14694 798 aaKnown RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 RTP5Q14D33 572 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 TMED2Q15363 201 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 SYTL3Q4VX76 610 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 BEND6Q5SZJ8 279 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 FAM45BPQ6NSW5 357 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 ADGRD1Q6QNK2 874 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 SBSNQ6UWP8 590 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 UNC5DQ6UXZ4 953 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 SH2D5Q6ZV89 423 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 NEK10Q6ZWH5 1172 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 USP53Q70EK8 1073 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 B3GNT8Q7Z7M8 397 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 SLC9B2Q86UD5 537 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 TBC1D21Q8IYX1 336 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 ADGRF3Q8IZF5 1079 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 CENPLQ8N0S6 344 aaPredicted RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 IQCKQ8N0W5 287 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 PLD6Q8N2A8 252 aaKnown RBP6.78□□□□□ -1.32
LIMD1-204ENST00000474665 LINC01555Q8NAE3 123 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 MYRIPQ8NFW9 859 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 OR52E1Q8NGJ3 308 aa6.78□□□□□ -1.32
LIMD1-204ENST00000474665 OR5K2Q8NHB8 316 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms