RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 PRDM8Q9NQV8 689 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SEMA5BQ9P283 1151 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 EIF3KQ9UBQ5 218 aaKnown RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 TCFL5Q9UL49 500 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 HSF4Q9ULV5 492 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SORCS3Q9UPU3 1222 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 V9GYQ6 96 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 RTL1A6NKG5 1358 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 AOX1Q06278 1338 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 A0A1W2PQ72 361 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 TCRBV16S1A1N1A0A5B0 115 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 C9orf170A2RU37 121 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 HELTA6NFD8 242 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 CFAP73A6NFT4 308 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 RFPL4AA6NLU0 287 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 E5RJQ4 531 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 RFPL4AL1F8VTS6 287 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ZNF701M0R085 212 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 SULT1C4O75897 302 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SLCO2B1O94956 709 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 LDOC1O95751 146 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 SERPINA5P05154 406 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 MPOP05164 745 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 IFI30P13284 250 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 CD19P15391 556 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 CD36P16671 472 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 NR4A1P22736 598 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 BMP8BP34820 402 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 AHRP35869 848 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PSMB10P40306 273 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PHKA2P46019 1235 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 FHITP49789 147 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ATP5J2P56134 94 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 STX1BP61266 288 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SIM1P81133 766 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 MRPS11P82912 194 aaKnown RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 MGAT3Q09327 533 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 DUSP8Q13202 625 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 NAE1Q13564 534 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PWP1Q13610 501 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 CSHL1Q14406 222 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 LRRC14Q15048 493 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PPP1R3AQ16821 1122 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 HYAL4Q2M3T9 481 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PRICKLE4Q2TBC4 344 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SEL1L2Q5TEA6 688 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 KHDRBS2Q5VWX1 349 aaKnown RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 RESP18Q5W5W9 173 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 NAPEPLDQ6IQ20 393 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 CHADLQ6NUI6 762 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 RBM43Q6ZSC3 357 aaKnown RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 BBS12Q6ZW61 710 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 BMP8AQ7Z5Y6 402 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 TNS4Q8IZW8 715 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 UBL4BQ8N7F7 174 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 GLIS3Q8NEA6 775 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 DBF4BQ8NFT6 615 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 STXBP6Q8NFX7 210 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 UFD1Q92890 307 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SGTBQ96EQ0 304 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ELF4Q99607 663 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 CDCA3Q99618 268 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 P2RY13Q9BPV8 354 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 FAM110AQ9BQ89 295 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 KLHDC3Q9BQ90 382 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 C2orf88Q9BSF0 95 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 WDR18Q9BV38 432 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 TPPP3Q9BW30 176 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 IFT27Q9BW83 186 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SPNS1Q9H2V7 528 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SMYD3Q9H7B4 428 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 LPAR2Q9HBW0 351 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 CHST7Q9NS84 486 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ADAM22Q9P0K1 906 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ZNF70Q9UC06 446 aaPredicted RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 HAO1Q9UJM8 370 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 MGAT4AQ9UM21 535 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 TRIM35Q9UPQ4 493 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ABCC4O15439 1325 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 WDR17Q8IZU2 1322 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 CAMSAP2Q08AD1 1489 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 SCAF11Q99590 1463 aaKnown RBP3.41□□□□□ -1.86
UBR3-208ENST00000474426 TRAV25A0A0B4J276 109 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 A0A0G2JMP0 313 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 A0A0X1KG70 313 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PRAMEF27A3QJZ7 478 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PRAMEF25A6NGN4 478 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ANKDD1BA6NHY2 528 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 A8MUA0 341 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PRAMEF26H0Y7S4 382 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 CCSO14618 274 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PRRG1O14668 218 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ZNF264O43296 627 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 HSPA12AO43301 675 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PRAMEF4O60810 478 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PRAMEF11O60813 436 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 ADAP1O75689 374 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 DCTN3O75935 186 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 TNNC2P02585 160 aa3.41□□□□□ -1.86
UBR3-208ENST00000474426 PCCAP05165 728 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms