RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 TSTA3Q13630 321 aaPredicted RBP8.11□□□□□ -1.11
CNN3-205ENST00000474409 PFKFB4Q16877 469 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 C14orf28Q4W4Y0 310 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 LIPMQ5VYY2 423 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 ZCCHC8Q6NZY4 707 aaKnown RBP8.11□□□□□ -1.11
CNN3-205ENST00000474409 IYDQ6PHW0 289 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 MTERF4Q7Z6M4 381 aaKnown RBP8.11□□□□□ -1.11
CNN3-205ENST00000474409 NAGSQ8N159 534 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 SFRP1Q8N474 314 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 ARL10Q8N8L6 244 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 PTGR2Q8N8N7 351 aaPredicted RBP8.11□□□□□ -1.11
CNN3-205ENST00000474409 FBXO15Q8NCQ5 510 aaPredicted RBP8.11□□□□□ -1.11
CNN3-205ENST00000474409 PHC3Q8NDX5 983 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 OR9A1PQ8NGU1 263 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 MDM1Q8TC05 714 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 SAP25Q8TEE9 199 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 ATL1Q8WXF7 558 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 DLG3Q92796 817 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 PHF21BQ96EK2 531 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 MED8Q96G25 268 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 CCDC138Q96M89 665 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 MECRQ9BV79 373 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 EDEM2Q9BV94 578 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 DUSP23Q9BVJ7 150 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 ZMYND15Q9H091 742 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 KIR3DX1Q9H7L2 352 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 NLGN3Q9NZ94 848 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 NCKIPSDQ9NZQ3 722 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 ZNF624Q9P2J8 865 aaPredicted RBP8.11□□□□□ -1.11
CNN3-205ENST00000474409 CPNE7Q9UBL6 633 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 PCNX2A6NKB5 2137 aa8.11□□□□□ -1.11
CNN3-205ENST00000474409 LAMA1P25391 3075 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 G3V2L1 256 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 STX16-NPEPL1H3BU86 382 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 STX16O14662 325 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 NOBOXO60393 691 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 CCNT2O60583 730 aaKnown RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 LRP3O75074 770 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 H2AFYO75367 372 aaKnown RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 IPO13O94829 963 aaKnown RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 SLC16A8O95907 504 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 BPGMP07738 259 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 SBK3P0C264 359 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 ZNF806P0C7X5 589 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 ZNF883P0CG24 379 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 XRCC1P18887 633 aaPredicted RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 IMPA1P29218 277 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 EEF1DP29692 281 aaKnown RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 ALDH3A1P30838 453 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 SLC19A1P41440 591 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 HSPA7P48741 367 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 HNMTP50135 292 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 RAB28P51157 221 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 ALDH18A1P54886 795 aaKnown RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 WDR4P57081 412 aaKnown RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 TBPL1P62380 186 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 UBE2IP63279 158 aaKnown RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 NFKB2Q00653 900 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 MPP2Q14168 576 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 GPR18Q14330 331 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 SETDB1Q15047 1291 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 SF3A2Q15428 464 aaKnown RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 CCSMST1Q4G0I0 132 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 AASDHQ4L235 1098 aaPredicted RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 FBXO48Q5FWF7 155 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 CFAP157Q5JU67 520 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 ANKS6Q68DC2 871 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 SULT1C3Q6IMI6 304 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 ZNF761Q86XN6 746 aaPredicted RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 NUDCD3Q8IVD9 361 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 C10orf107Q8IVU9 208 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 SFTPA2Q8IWL1 248 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 TRIM42Q8IWZ5 723 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 RBM12BQ8IXT5 1001 aaKnown RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 SYTL1Q8IYJ3 562 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 SLC25A45Q8N413 288 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 PPFIBP2Q8ND30 876 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 OR52E1Q8NGJ3 308 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 OR4C6Q8NH72 309 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 DENND1AQ8TEH3 1009 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 PPP4R1Q8TF05 950 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 UBTD2Q8WUN7 234 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 JPH3Q8WXH2 748 aaPredicted RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 FBXL8Q96CD0 374 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 CAMK1GQ96NX5 476 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 IL17FQ96PD4 163 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 TMEM237Q96Q45 408 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 PKP4Q99569 1192 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 TMEM79Q9BSE2 394 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 SEMA4GQ9NTN9 838 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 ABCF3Q9NUQ8 709 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 EVA1BQ9NVM1 165 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 STOX2Q9P2F5 926 aaPredicted RBP8.1□□□□□ -1.11
CNN3-205ENST00000474409 LNPEPQ9UIQ6 1025 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 ANGPTL3Q9Y5C1 460 aa8.1□□□□□ -1.11
CNN3-205ENST00000474409 SPTBP11277 2137 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 PRAMEF33A0A0G2JMD5 474 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 RHPN2P1A8MT19 583 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 TARM1B6A8C7 271 aa8.09□□□□□ -1.11
CNN3-205ENST00000474409 POLR3GO15318 223 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms