RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 PLCD4Q9BRC7 762 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 ZDHHC5Q9C0B5 715 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 SLC32A1Q9H598 525 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 RABEP2Q9H5N1 569 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 NPHS2Q9NP85 383 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 MID1IP1Q9NPA3 183 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 SEMA4BQ9NPR2 832 aaPredicted RBP10□□□□□ -0.81
PRPF38A-202ENST00000474048 WASH6PQ9NQA3 447 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 PRDM8Q9NQV8 689 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 GPR27Q9NS67 375 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 POT1Q9NUX5 634 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 DNAJC11Q9NVH1 559 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 TAAR2Q9P1P5 351 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 IKZF3Q9UKT9 509 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 EPB41L3Q9Y2J2 1087 aaPredicted RBP10□□□□□ -0.81
PRPF38A-202ENST00000474048 FIS1Q9Y3D6 152 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 PLEKHM1Q9Y4G2 1056 aa10□□□□□ -0.81
PRPF38A-202ENST00000474048 FANCMQ8IYD8 2048 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 TRPC5OSA6NMA1 111 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 PRR33A8MZF0 331 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 C10orf142B7Z368 130 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 MYO1CO00159 1063 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 AQP9O43315 295 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 GALR2O43603 387 aaPredicted RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 KLK8O60259 260 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 LYPLA1O75608 230 aaPredicted RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 SIX3O95343 332 aaPredicted RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 CER1O95813 267 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 WNT1P04628 370 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 SYPP08247 313 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 RPS17P08708 135 aaKnown RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 SBK3P0C264 359 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 MTHFD2P13995 350 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 ACADLP28330 430 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 HMOX2P30519 316 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 SHMT2P34897 504 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 RPL14P50914 215 aaKnown RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 PNLIPRP1P54315 467 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 PKNOX1P55347 436 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 GALNT1Q10472 559 aaPredicted RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 C1orf61Q13536 156 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 NAE1Q13564 534 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 ARHGAP19Q14CB8 494 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 RPE65Q16518 533 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 ZNF658BQ4V348 819 aaPredicted RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 ARL13AQ5H913 290 aaPredicted RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 TPRG1LQ5T0D9 272 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 CAPRIN2Q6IMN6 1127 aaKnown RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 ARMC6Q6NXE6 501 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 MBOAT1Q6ZNC8 495 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 GPRIN3Q6ZVF9 776 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 SPATA21Q7Z572 469 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 GOLGA7Q7Z5G4 137 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 RBM12BQ8IXT5 1001 aaKnown RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 CACNA2D3Q8IZS8 1091 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 TMEM151AQ8N4L1 468 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 PIWIL2Q8TC59 973 aaKnown RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 GPBAR1Q8TDU6 330 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 ZDHHC1Q8WTX9 485 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 ZC3H10Q96K80 434 aaKnown RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 CCT8L2Q96SF2 557 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 INSM2Q96T92 566 aaPredicted RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 PKP4Q99569 1192 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 MIPEPQ99797 713 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 PRRX2Q99811 253 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 ELAC2Q9BQ52 826 aaKnown RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 ORAI3Q9BRQ5 295 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 HAUS8Q9BT25 410 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 LRRC61Q9BV99 259 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 NUSAP1Q9BXS6 441 aaKnown RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 SHCBP1LQ9BZQ2 653 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 PCBD2Q9H0N5 130 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 ATG10Q9H0Y0 220 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 ACTR8Q9H981 624 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 SLCO1B3Q9NPD5 702 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 STOX2Q9P2F5 926 aaPredicted RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 KLHL14Q9P2G3 628 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 VTI1BQ9UEU0 232 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 MARCOQ9UEW3 520 aaPredicted RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 TBC1D29Q9UFV1 150 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 PTBP2Q9UKA9 531 aaKnown RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 PCTPQ9UKL6 214 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 PCYT1BQ9Y5K3 369 aaPredicted RBP9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 KCNE2Q9Y6J6 123 aa9.99□□□□□ -0.81
PRPF38A-202ENST00000474048 SPAG17Q6Q759 2223 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 CACNA1IQ9P0X4 2223 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 A0A0G2JND7 137 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 OR52A4PA6NMU1 304 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 ZW10O43264 779 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 HRO43593 1189 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 SNNO75324 88 aaPredicted RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 CCNDBP1O95273 360 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 TGDSO95455 350 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 SLC16A8O95907 504 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 FUCA1P04066 466 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 KCNC1P48547 511 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 AGTR2P50052 363 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 RAB28P51157 221 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 CDH13P55290 713 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms