RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 GSNP06396 782 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 IL5RAQ01344 420 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 EMX1Q04741 257 aaPredicted RBP20.65■□□□□ 0.9
COL18A1-207ENST00000473212 PTRHD1Q6GMV3 140 aaKnown RBP20.65■□□□□ 0.9
COL18A1-207ENST00000473212 NCEH1Q6PIU2 408 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 ARL10Q8N8L6 244 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 EGFL8Q99944 293 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 MTRRQ9UBK8 725 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 LHX3Q9UBR4 397 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 NAALAD2Q9Y3Q0 740 aa20.65■□□□□ 0.9
COL18A1-207ENST00000473212 ILVBLA1L0T0 632 aa20.64■□□□□ 0.9
COL18A1-207ENST00000473212 ZNF840PA6NDX5 716 aa20.64■□□□□ 0.9
COL18A1-207ENST00000473212 SEC22BO75396 215 aa20.64■□□□□ 0.9
COL18A1-207ENST00000473212 PRAMEF1O95521 474 aa20.64■□□□□ 0.9
COL18A1-207ENST00000473212 CDK5R2Q13319 367 aa20.64■□□□□ 0.9
COL18A1-207ENST00000473212 GALNT5Q7Z7M9 940 aa20.64■□□□□ 0.9
COL18A1-207ENST00000473212 GPR149Q86SP6 731 aa20.64■□□□□ 0.9
COL18A1-207ENST00000473212 CARNMT1Q8N4J0 409 aa20.64■□□□□ 0.9
COL18A1-207ENST00000473212 FAR1Q8WVX9 515 aa20.64■□□□□ 0.9
COL18A1-207ENST00000473212 PDLIM5Q96HC4 596 aaKnown RBP20.64■□□□□ 0.9
COL18A1-207ENST00000473212 OR52E6Q96RD3 313 aa20.64■□□□□ 0.9
COL18A1-207ENST00000473212 ANGPTL3Q9Y5C1 460 aa20.64■□□□□ 0.9
COL18A1-207ENST00000473212 KRBA1A5PL33 1030 aa20.64■□□□□ 0.89
COL18A1-207ENST00000473212 BCKDKO14874 412 aa20.64■□□□□ 0.89
COL18A1-207ENST00000473212 FTH1P02794 183 aa20.64■□□□□ 0.89
COL18A1-207ENST00000473212 FUT4P22083 530 aa20.64■□□□□ 0.89
COL18A1-207ENST00000473212 LSM3P62310 102 aaKnown RBP20.64■□□□□ 0.89
COL18A1-207ENST00000473212 PHC1P78364 1004 aa20.64■□□□□ 0.89
COL18A1-207ENST00000473212 RAPSNQ13702 412 aa20.64■□□□□ 0.89
COL18A1-207ENST00000473212 OXA1LQ15070 435 aa20.64■□□□□ 0.89
COL18A1-207ENST00000473212 TCTN1Q2MV58 587 aa20.64■□□□□ 0.89
COL18A1-207ENST00000473212 FKBP9P1Q75LS8 142 aa20.64■□□□□ 0.89
COL18A1-207ENST00000473212 ANKRD46Q86W74 232 aa20.64■□□□□ 0.89
COL18A1-207ENST00000473212 ZCCHC7Q8N3Z6 543 aaKnown RBP20.64■□□□□ 0.89
COL18A1-207ENST00000473212 SH3GL1Q99961 368 aa20.64■□□□□ 0.89
COL18A1-207ENST00000473212 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.64■□□□□ 0.894e-6■■■■■ 32.4
COL18A1-207ENST00000473212 KAT8Q9H7Z6 458 aaKnown RBP20.64■□□□□ 0.89
COL18A1-207ENST00000473212 HMG20AQ9NP66 347 aa20.64■□□□□ 0.89
COL18A1-207ENST00000473212 CASP8AP2Q9UKL3 1982 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 PRRC2BQ5JSZ5 2229 aaKnown RBP20.63■□□□□ 0.89
COL18A1-207ENST00000473212 TMEM88BA6NKF7 163 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 SLC25A14O95258 325 aaPredicted RBP20.63■□□□□ 0.89
COL18A1-207ENST00000473212 IL6P05231 212 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 ALDH4A1P30038 563 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 HPCAL1P37235 193 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 ACLYP53396 1101 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 CACHD1Q5VU97 1274 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 ADGRG2Q8IZP9 1017 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 ZFP90Q8TF47 636 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 CASD1Q96PB1 797 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 MAGEE1Q9HCI5 957 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 PKP3Q9Y446 797 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 PCDHB14Q9Y5E9 798 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 PCDHGA4Q9Y5G9 962 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 ORC6Q9Y5N6 252 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 TMEM247A6NEH6 219 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 ALDH2P05091 517 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 UGT2B4P06133 528 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 GNPDA1P46926 289 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 NCCRP1Q6ZVX7 275 aaPredicted RBP20.63■□□□□ 0.89
COL18A1-207ENST00000473212 OR7A2PQ8NGA2 310 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 MCOLN3Q8TDD5 553 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 CLMPQ9H6B4 373 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 AKIP1Q9NQ31 210 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 VNN3Q9NY84 501 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 ERVK-18Q9QC07 812 aa20.63■□□□□ 0.89
COL18A1-207ENST00000473212 ZNF490Q9ULM2 529 aaPredicted RBP20.63■□□□□ 0.89
COL18A1-207ENST00000473212 A0A1B0GVM2 712 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 LOC730098B7Z3J9 87 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 H7C0S8 307 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 SLC16A6O15403 523 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 SMAD6O43541 496 aaKnown RBP20.62■□□□□ 0.89
COL18A1-207ENST00000473212 ULK1O75385 1050 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 ANGPTL1O95841 491 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 RETP07949 1114 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 FMO3P31513 532 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 RYKP34925 604 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 MAP2K4P45985 399 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 NRIP1P48552 1158 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 CACNG1Q06432 222 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 MAD2L1Q13257 205 aaPredicted RBP20.62■□□□□ 0.89
COL18A1-207ENST00000473212 RGL4Q8IZJ4 473 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 STK40Q8N2I9 435 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 GLB1L3Q8NCI6 653 aaPredicted RBP20.62■□□□□ 0.89
COL18A1-207ENST00000473212 DBF4BQ8NFT6 615 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 OR52E4Q8NGH9 312 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 NDNFQ8TB73 568 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 ERLEC1Q96DZ1 483 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 MROQ9BYG7 248 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 LRTM1Q9HBL6 345 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 SEC24AO95486 1093 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 RPLP2P05387 115 aaKnown RBP20.62■□□□□ 0.89
COL18A1-207ENST00000473212 CCDC159P0C7I6 412 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 CYP4B1P13584 511 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 OR1D2P34982 312 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 RHOAP61586 193 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 IL1RL1Q01638 556 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 FBXO22Q8NEZ5 403 aa20.62■□□□□ 0.89
COL18A1-207ENST00000473212 FAM120BQ96EK7 910 aaKnown RBP20.62■□□□□ 0.89
COL18A1-207ENST00000473212 SLC22A12Q96S37 553 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms