RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 SARS2Q9NP81 518 aaKnown RBP3.46□□□□□ -1.86
XRN1-209ENST00000472625 SIX2Q9NPC8 291 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 ANLNQ9NQW6 1124 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 FBXO8Q9NRD0 319 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 SEPT11Q9NVA2 429 aaKnown RBP3.46□□□□□ -1.86
XRN1-209ENST00000472625 GOLGA6AQ9NYA3 693 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 FOXJ2Q9P0K8 574 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 TAAR2Q9P1P5 351 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 RCOR3Q9P2K3 495 aaPredicted RBP3.46□□□□□ -1.86
XRN1-209ENST00000472625 LHX3Q9UBR4 397 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 CNOT8Q9UFF9 292 aaKnown RBP3.46□□□□□ -1.86
XRN1-209ENST00000472625 NOCTQ9UK39 431 aaKnown RBP3.46□□□□□ -1.86
XRN1-209ENST00000472625 PILRAQ9UKJ1 303 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 FZD10Q9ULW2 581 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 MYO6Q9UM54 1294 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 PHTF1Q9UMS5 762 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 VPS4AQ9UN37 437 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 RPL26L1Q9UNX3 145 aaKnown RBP3.46□□□□□ -1.86
XRN1-209ENST00000472625 NEU3Q9UQ49 428 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 POLHQ9Y253 713 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 SLC17A4Q9Y2C5 497 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 REXO2Q9Y3B8 237 aaKnown RBP3.46□□□□□ -1.86
XRN1-209ENST00000472625 PRKAB1Q9Y478 270 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 TMEM184BQ9Y519 407 aaPredicted RBP3.46□□□□□ -1.86
XRN1-209ENST00000472625 SNX10Q9Y5X0 201 aa3.46□□□□□ -1.86
XRN1-209ENST00000472625 MN1Q10571 1320 aaPredicted RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 AHCTF1Q8WYP5 2266 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 IGHV1OR21-1A0A087WYE8 117 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 KLHL33A6NCF5 533 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 FAM72CH0Y354 149 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 DFFAO00273 331 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 TRAFD1O14545 582 aaPredicted RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 TEX33O43247 280 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 CCP110O43303 1012 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 HOXA3O43365 443 aaPredicted RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 HTRA2O43464 458 aaPredicted RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 VEGFDO43915 354 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 STK17BO94768 372 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 GFPT2O94808 682 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 HEXIM1O94992 359 aaKnown RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 AGFG2O95081 481 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 DDAH2O95865 285 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 F3P13726 295 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 PSMA2P25787 234 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 CD1CP29017 333 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 CASP14P31944 242 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 PCK1P35558 622 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 GARSP41250 739 aaKnown RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 MMP13P45452 471 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 PAPOLAP51003 745 aaKnown RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 OR1D5P58170 312 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 POLR2FP61218 127 aaKnown RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 TMPRSS15P98073 1019 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 B4GALNT1Q00973 533 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 PDE1BQ01064 536 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 MC2RQ01718 297 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 FMO1Q01740 532 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 MGAT5Q09328 741 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 RALGDSQ12967 914 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 MRPL49Q13405 166 aaKnown RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 TUBA3CQ13748 450 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 TGIF1Q15583 401 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 CNGA3Q16281 694 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.45□□□□□ -1.86
XRN1-209ENST00000472625 BOLA3Q53S33 107 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 PPP6R3Q5H9R7 873 aaPredicted RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 ERMARDQ5T6L9 678 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 FHL5Q5TD97 284 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 FAM72AQ5TYM5 149 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 MARC1Q5VT66 337 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 ZDHHC20Q5W0Z9 365 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 ANKS6Q68DC2 871 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 FAM72DQ6L9T8 149 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 TUBA3EQ6PEY2 450 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 WDR59Q6PJI9 974 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 MON1BQ7L1V2 547 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 ZNF627Q7L945 461 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 FAM72BQ86X60 149 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 CAMK1DQ8IU85 385 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 CCDC13Q8IYE1 715 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 SFRP1Q8N474 314 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 EXD1Q8NHP7 514 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 PDCD6IPQ8WUM4 868 aaKnown RBP3.45□□□□□ -1.86
XRN1-209ENST00000472625 THAP4Q8WY91 577 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 TM9SF4Q92544 642 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 FATE1Q969F0 183 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 RTP4Q96DX8 246 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 CLIP3Q96DZ5 547 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 SCRN2Q96FV2 425 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 ZDHHC12Q96GR4 267 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 COQ10AQ96MF6 247 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 FCRL4Q96PJ5 515 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 NUDCD1Q96RS6 583 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 C17orf62Q9BQA9 187 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 MGME1Q9BQP7 344 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 NUDT22Q9BRQ3 303 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 ZSCAN5AQ9BUG6 496 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 ADGRE3Q9BY15 652 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 GPR87Q9BY21 358 aa3.45□□□□□ -1.86
XRN1-209ENST00000472625 FRMD8Q9BZ67 464 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms