RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 MLIPQ5VWP3 458 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 IZUMO3Q5VZ72 239 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 ZNF655Q8N720 491 aaPredicted RBP7.79□□□□□ -1.16
USP48-207ENST00000471752 UBL4BQ8N7F7 174 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 C19orf47Q8N9M1 422 aaKnown RBP7.79□□□□□ -1.16
USP48-207ENST00000471752 DNAAF3Q8N9W5 541 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 OR6P1Q8NGX9 317 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 OR4L1Q8NH43 312 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 INPP5DQ92835 1189 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 FAM136AQ96C01 138 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 GBP5Q96PP8 586 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 PSMG3-AS1Q96PY0 264 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 NLNQ9BYT8 704 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 MVB12BQ9H7P6 319 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 RAB6BQ9NRW1 208 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 IL1RAPL1Q9NZN1 696 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 ANKMY1Q9P2S6 941 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 ANAPC2Q9UJX6 822 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 ZNF148Q9UQR1 794 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 ASF1AQ9Y294 204 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 CSAG2Q9Y5P2 127 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 DOPEY1Q5JWR5 2465 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 CCDC88CQ9P219 2028 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 HIVEP3Q5T1R4 2406 aa7.79□□□□□ -1.16
USP48-207ENST00000471752 GOLGA6L9A6NEM1 432 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 TTLL8A6PVC2 850 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 C2orf74A8MZ97 194 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 MIF4GDA9UHW6 222 aaKnown RBP7.78□□□□□ -1.16
USP48-207ENST00000471752 IFRD1O00458 451 aaPredicted RBP7.78□□□□□ -1.16
USP48-207ENST00000471752 PRICKLE3O43900 615 aaPredicted RBP7.78□□□□□ -1.16
USP48-207ENST00000471752 CTSVO60911 334 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 GPC4O75487 556 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 TMEM63AO94886 807 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 AP2A2O94973 939 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 RECKO95980 971 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 PTMAP06454 111 aaKnown RBP7.78□□□□□ -1.16
USP48-207ENST00000471752 UMODP07911 640 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 CYP2A7P20853 494 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 MAGP20916 626 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 AOAHP28039 575 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 OTX2P32243 289 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 CXCR5P32302 372 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 NSG1P42857 185 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 GCGRP47871 477 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 PDE1BQ01064 536 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 SRSF11Q05519 484 aaKnown RBP7.78□□□□□ -1.16
USP48-207ENST00000471752 CDH17Q12864 832 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 PRKAA1Q13131 559 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 RPA4Q13156 261 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 MRPL49Q13405 166 aaKnown RBP7.78□□□□□ -1.16
USP48-207ENST00000471752 FASTKQ14296 549 aaKnown RBP7.78□□□□□ -1.16
USP48-207ENST00000471752 EIF2S3LQ2VIR3 472 aaKnown RBP7.78□□□□□ -1.16
USP48-207ENST00000471752 P3H1Q32P28 736 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 CTSL3PQ5NE16 218 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 ANKRD22Q5VYY1 191 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 PACS1Q6VY07 963 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 SHISA6Q6ZSJ9 500 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 SYVN1Q86TM6 617 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 BPHLQ86WA6 291 aaPredicted RBP7.78□□□□□ -1.16
USP48-207ENST00000471752 AGGF1Q8N302 714 aaeCLIP7.78□□□□□ -1.16
USP48-207ENST00000471752 MPP5Q8N3R9 675 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 METTL27Q8N6F8 245 aaPredicted RBP7.78□□□□□ -1.16
USP48-207ENST00000471752 TTC13Q8NBP0 860 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 OR5K2Q8NHB8 316 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 DENND1AQ8TEH3 1009 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 CPT1BQ92523 772 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 LRFN5Q96NI6 719 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 SLC30A3Q99726 388 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 SLC25A23Q9BV35 468 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 AP1M1Q9BXS5 423 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 P2RY12Q9H244 342 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 LUC7LQ9NQ29 371 aaKnown RBP7.78□□□□□ -1.16
USP48-207ENST00000471752 LATS2Q9NRM7 1088 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 SNX7Q9UNH6 387 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 TCAF1Q9Y4C2 921 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 HEBP2Q9Y5Z4 205 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 MYO9AB2RTY4 2548 aa7.78□□□□□ -1.16
USP48-207ENST00000471752 SNRNP200O75643 2136 aaKnown RBP7.78□□□□□ -1.16
USP48-207ENST00000471752 ABCA12Q86UK0 2595 aa7.77□□□□□ -1.16
USP48-207ENST00000471752 SHANK1Q9Y566 2161 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 PIKFYVEQ9Y2I7 2098 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 LOC105369274A0A096LPK9 316 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 LOC102723532A0A0G2JNH3 316 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 BLACEA4D250 179 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 ISM1B1AKI9 464 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 E7EQ34 232 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 FFAR3O14843 346 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 LIN7AO14910 233 aaPredicted RBP7.77□□□□□ -1.17
USP48-207ENST00000471752 CD3EAPO15446 510 aaKnown RBP7.77□□□□□ -1.17
USP48-207ENST00000471752 GPR42O15529 346 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 OR2B3O76000 313 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 SORBS2O94875 1100 aaKnown RBP7.77□□□□□ -1.17
USP48-207ENST00000471752 KLK3P07288 261 aaPredicted RBP7.77□□□□□ -1.17
USP48-207ENST00000471752 APRTP07741 180 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 RAB40ALP0C0E4 278 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 ADRA1DP25100 572 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 MGAT1P26572 445 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 COL8A1P27658 744 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 PKLRP30613 574 aa7.77□□□□□ -1.17
USP48-207ENST00000471752 CETN2P41208 172 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms