RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 RAB42Q8N4Z0 105 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 GPATCH11Q8N954 259 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 FBXO15Q8NCQ5 510 aaPredicted RBP14.81□□□□□ -0.04
SDC3-203ENST00000471567 OR2L8Q8NGY9 312 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 ASB11Q8WXH4 323 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 USP7Q93009 1102 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 TEFMQ96QE5 360 aaKnown RBP14.81□□□□□ -0.04
SDC3-203ENST00000471567 FMO2Q99518 471 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 CPNE1Q99829 537 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 ZPBPQ9BS86 351 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 MCMBPQ9BTE3 642 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 MENTQ9BUN1 341 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 ASPSCR1Q9BZE9 553 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 RHOJQ9H4E5 214 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 SMYD2Q9NRG4 433 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 SIDT1Q9NXL6 827 aaKnown RBP14.81□□□□□ -0.04
SDC3-203ENST00000471567 SLC39A1Q9NY26 324 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 ACTR10Q9NZ32 417 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 TXNDC16Q9P2K2 825 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 SLC39A10Q9ULF5 831 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 ZMIZ1Q9ULJ6 1067 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 APC2O95996 2303 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 ACACAQ13085 2346 aa14.81□□□□□ -0.04
SDC3-203ENST00000471567 GFYI3L273 518 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 TLX3O43711 291 aaPredicted RBP14.8□□□□□ -0.04
SDC3-203ENST00000471567 ZBTB11O95625 1053 aaPredicted RBP14.8□□□□□ -0.04
SDC3-203ENST00000471567 C1QAP02745 245 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 CDH3P22223 829 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 MCM3P25205 808 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 CD82P27701 267 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 ECHS1P30084 290 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 BDKRB1P46663 353 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 PDAP1Q13442 181 aaKnown RBP14.8□□□□□ -0.04
SDC3-203ENST00000471567 NAB1Q13506 487 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 ST3GAL2Q16842 350 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 DCAF12Q5T6F0 453 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 CYB5D1Q6P9G0 228 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 PAQR3Q6TCH7 311 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 HMGCLL1Q8TB92 370 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 SLC22A18Q96BI1 424 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 NRTNQ99748 197 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 PITPNM3Q9BZ71 974 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 SPATA7Q9P0W8 599 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 LNPEPQ9UIQ6 1025 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 PLAGL1Q9UM63 463 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 RUVBL2Q9Y230 463 aaKnown RBP14.8□□□□□ -0.04
SDC3-203ENST00000471567 PCDHB11Q9Y5F2 797 aa14.8□□□□□ -0.04
SDC3-203ENST00000471567 FAM95CA0A1B0GW59 222 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 ARHGEF33A8MVX0 844 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 CXorf49A8MYA2 514 aaPredicted RBP14.79□□□□□ -0.04
SDC3-203ENST00000471567 ESPNB1AK53 854 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 C9orf172C9J069 976 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 MYO1CO00159 1063 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 ZBTB14O43829 449 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 PRAMEF10O60809 474 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 UGT2B7P16662 529 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 PHBP35232 272 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 HSD17B2P37059 387 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 GP5P40197 560 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 EIF2S3P41091 472 aaKnown RBP14.79□□□□□ -0.04
SDC3-203ENST00000471567 MAP1BP46821 2468 aaKnown RBP14.79□□□□□ -0.04
SDC3-203ENST00000471567 ARL4DP49703 201 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 IL2P60568 153 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 HSD11B2P80365 405 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 IL11RAQ14626 422 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 SLC5A12Q1EHB4 618 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 FRYQ5TBA9 3013 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 ANKS6Q68DC2 871 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 SPESP1Q6UW49 350 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 CEACAM20Q6UY09 585 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 BPHLQ86WA6 291 aaPredicted RBP14.79□□□□□ -0.04
SDC3-203ENST00000471567 D2HGDHQ8N465 521 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 LINC01555Q8NAE3 123 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 ZNF248Q8NDW4 579 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 OR9A1PQ8NGU1 263 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 FBF1Q8TES7 1133 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 EEF1AKMT1Q8WVE0 214 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 VPS39Q96JC1 886 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 ELMO2Q96JJ3 720 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 OR2A14Q96R47 310 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 SPHK1Q9NYA1 384 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 TSR3Q9UJK0 312 aaKnown RBP14.79□□□□□ -0.04
SDC3-203ENST00000471567 BTRCQ9Y297 605 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 RAXQ9Y2V3 346 aa14.79□□□□□ -0.04
SDC3-203ENST00000471567 ISM1B1AKI9 464 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 POLR1CO15160 346 aaPredicted RBP14.78□□□□□ -0.04
SDC3-203ENST00000471567 SLC16A5O15375 505 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 RRP8O43159 456 aaKnown RBP14.78□□□□□ -0.04
SDC3-203ENST00000471567 MAP3K7O43318 606 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 FKBP9O95302 570 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 C8GP07360 202 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 RHOXF2BP0C7M4 288 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 MAP4P27816 1152 aaKnown RBP14.78□□□□□ -0.04
SDC3-203ENST00000471567 POU4F1Q01851 419 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 ACY1Q03154 408 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 ARHGAP19Q14CB8 494 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 CYP2A13Q16696 494 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 KBTBD12Q3ZCT8 623 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 CCSMST1Q4G0I0 132 aa14.78□□□□□ -0.04
SDC3-203ENST00000471567 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms