RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 NPY2RP49146 381 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 TTPAP49638 278 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 PRKG2Q13237 762 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 GPR19Q15760 415 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 SYTL3Q4VX76 610 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 DNAJC21Q5F1R6 531 aaKnown RBP13.07□□□□□ -0.32
HMGN1-211ENST00000471260 ARMC3Q5W041 872 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 SPESP1Q6UW49 350 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 ZNF534Q76KX8 674 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 GSTA5Q7RTV2 222 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 SYVN1Q86TM6 617 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 HOOK3Q86VS8 718 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 APLFQ8IW19 511 aaPredicted RBP13.07□□□□□ -0.32
HMGN1-211ENST00000471260 IQCKQ8N0W5 287 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 MPP5Q8N3R9 675 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 GLIS1Q8NBF1 620 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 ASZ1Q8WWH4 475 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 PPM1MQ96MI6 270 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 ZNF778Q96MU6 729 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 RUNDC3BQ96NL0 473 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 TRAPPC9Q96Q05 1148 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 HGH1Q9BTY7 390 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 TWSG1Q9GZX9 223 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 ACTL8Q9H568 366 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 FAM114A2Q9NRY5 505 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 ACTR10Q9NZ32 417 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 BFARQ9NZS9 450 aa13.07□□□□□ -0.32
HMGN1-211ENST00000471260 FARSAQ9Y285 508 aaKnown RBP13.07□□□□□ -0.32
HMGN1-211ENST00000471260 TLN1Q9Y490 2541 aaKnown RBP13.07□□□□□ -0.32
HMGN1-211ENST00000471260 MKRN2OSH3BPM6 223 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 PRMT5O14744 637 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-211ENST00000471260 EIF3HO15372 352 aaKnown RBP eCLIP13.06□□□□□ -0.32
HMGN1-211ENST00000471260 OR1I1O60431 355 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 RPN2P04844 631 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 HBQ1P09105 142 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 RAB40ALP0C0E4 278 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 ZSCAN5DPP0CG00 497 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 ST6GAL1P15907 406 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 CSRP3P50461 194 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 GYS2P54840 703 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 BASP1P80723 227 aaKnown RBP13.06□□□□□ -0.32
HMGN1-211ENST00000471260 GUCY2DQ02846 1103 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 KCNC4Q03721 635 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 UGT8Q16880 541 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 ATP1A1-AS1Q5TC04 95 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 UNC5AQ6ZN44 842 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 PRUNE1Q86TP1 453 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 SLC22A15Q8IZD6 547 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 OR5AR1Q8NGP9 310 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 ABHD17AQ96GS6 310 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 TCTN2Q96GX1 697 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 PANX3Q96QZ0 392 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 KRT12Q99456 494 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 DPH2Q9BQC3 489 aaPredicted RBP13.06□□□□□ -0.32
HMGN1-211ENST00000471260 AP1M1Q9BXS5 423 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 CAPS2Q9BXY5 557 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 RAB17Q9H0T7 212 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 MRM3Q9HC36 420 aaKnown RBP13.06□□□□□ -0.32
HMGN1-211ENST00000471260 CHRAC1Q9NRG0 131 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 TREX1Q9NSU2 369 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 CATSPERZQ9NTU4 200 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 ICKQ9UPZ9 632 aa13.06□□□□□ -0.32
HMGN1-211ENST00000471260 RRP15Q9Y3B9 282 aaKnown RBP13.06□□□□□ -0.32
HMGN1-211ENST00000471260 CDC14CA4D256 554 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 FAM187AA6NFU0 413 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 GOLGA6L10A6NI86 522 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 TMEM150CB9EJG8 249 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 E7EQ34 232 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 MEN1O00255 615 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 KPNA5O15131 536 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 RAD51CO43502 376 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 GPC4O75487 556 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 APOA4P06727 396 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 CHRM5P08912 532 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-211ENST00000471260 FURINP09958 794 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 TPSB2P20231 275 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 CYP2A7P20853 494 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 CCR7P32248 378 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 RORAP35398 523 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 PMS2P54278 862 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 ITGA1P56199 1179 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 SARNPP82979 210 aaKnown RBP13.05□□□□□ -0.32
HMGN1-211ENST00000471260 DHX34Q14147 1143 aaKnown RBP13.05□□□□□ -0.32
HMGN1-211ENST00000471260 KIR2DS3Q14952 304 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 TPSAB1Q15661 275 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 LACTB2Q53H82 288 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-211ENST00000471260 ZNF789Q5FWF6 425 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 TCTN3Q6NUS6 607 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 FAM199XQ6PEV8 388 aaPredicted RBP13.05□□□□□ -0.32
HMGN1-211ENST00000471260 MICALCLQ6ZW33 695 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 CROCCP2Q86T23 111 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 LRRC6Q86X45 466 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 GPR135Q8IZ08 494 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 DSELQ8IZU8 1212 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 SLC38A9Q8NBW4 561 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 MR1Q95460 341 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 CLIP3Q96DZ5 547 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 MS4A14Q96JA4 679 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 ZIM3Q96PE6 472 aa13.05□□□□□ -0.32
HMGN1-211ENST00000471260 NLNQ9BYT8 704 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms