RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 RAB28P51157 221 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 MAPK10P53779 464 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 PAQR3Q6TCH7 311 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 FAM129CQ86XR2 697 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 RASGRP3Q8IV61 690 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 KDF1Q8NAX2 398 aaPredicted RBP19.14■□□□□ 0.65
HDAC7-220ENST00000471235 PPM1MQ96MI6 270 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 CPNE1Q99829 537 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 TSPYL1Q9H0U9 437 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 ACTR10Q9NZ32 417 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 OR6C2Q9NZP2 312 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 VWA7Q9Y334 891 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 FREM2Q5SZK8 3169 aa19.14■□□□□ 0.65
HDAC7-220ENST00000471235 IGHV5-51A0A0C4DH38 117 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 C2orf74A8MZ97 194 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 RASGRF2O14827 1237 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 TLX3O43711 291 aaPredicted RBP19.13■□□□□ 0.65
HDAC7-220ENST00000471235 PEBP1P30086 187 aaKnown RBP19.13■□□□□ 0.65
HDAC7-220ENST00000471235 GP5P40197 560 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 SKIV2L2P42285 1042 aaKnown RBP19.13■□□□□ 0.65
HDAC7-220ENST00000471235 PDAP1Q13442 181 aaKnown RBP19.13■□□□□ 0.65
HDAC7-220ENST00000471235 LRRC8EQ6NSJ5 796 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 TTC23LQ6PF05 361 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 FBXO38Q6PIJ6 1188 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 CYHR1Q6ZMK1 362 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 CLEC14AQ86T13 490 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 CTAGE3PQ8IX95 158 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 PPM1NQ8N819 430 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 LMNTD1Q8N9Z9 388 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 LINC01555Q8NAE3 123 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 KLHL6Q8WZ60 621 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 UBXN4Q92575 508 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 PMEPA1Q969W9 287 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 RAD51AP1Q96B01 352 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 LINGO1Q96FE5 620 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 ZNF578Q96N58 590 aaPredicted RBP19.13■□□□□ 0.65
HDAC7-220ENST00000471235 RBBP8Q99708 897 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 THSD1Q9NS62 852 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 SPHK1Q9NYA1 384 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 TXNDC16Q9P2K2 825 aa19.13■□□□□ 0.65
HDAC7-220ENST00000471235 PIPSLA2A3N6 862 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 B4E171 279 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 TSPAN12O95859 305 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 CATP04040 527 aaKnown RBP19.12■□□□□ 0.65
HDAC7-220ENST00000471235 UGT2B7P16662 529 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 TSPAN7P41732 249 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 RGS4P49798 205 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 TAS2R39P59534 338 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 ERVPABLB-1P60509 514 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 NAB1Q13506 487 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 PROSER1Q86XN7 944 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 CARFQ8N187 725 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 OR2L8Q8NGY9 312 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 FLVCR1-AS1Q8TAF5 88 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 MAGEC3Q8TD91 643 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 DENND1AQ8TEH3 1009 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 EEF1AKMT1Q8WVE0 214 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 SLC41A2Q96JW4 573 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 RAB11FIP5Q9BXF6 653 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 PITPNM3Q9BZ71 974 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 SPATA7Q9P0W8 599 aa19.12■□□□□ 0.65
HDAC7-220ENST00000471235 C9orf172C9J069 976 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 MYO1CO00159 1063 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 TAF4O00268 1085 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 PRAMEF10O60809 474 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 FAM155BO75949 473 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 ACSL3O95573 720 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 SPTBP11277 2137 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 NELFEP18615 380 aaKnown RBP19.11■□□□□ 0.65
HDAC7-220ENST00000471235 SAT1P21673 171 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 CDH3P22223 829 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 PRDX3P30048 256 aaKnown RBP19.11■□□□□ 0.65
HDAC7-220ENST00000471235 PHBP35232 272 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 MC2RQ01718 297 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 ILF2Q12905 390 aaKnown RBP19.11■□□□□ 0.65
HDAC7-220ENST00000471235 ZNF460Q14592 562 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 SPESP1Q6UW49 350 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 TRIM73Q86UV7 250 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 TAX1BP1Q86VP1 789 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 KMT5CQ86Y97 462 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 GSPT2Q8IYD1 628 aaKnown RBP19.11■□□□□ 0.65
HDAC7-220ENST00000471235 FBXO15Q8NCQ5 510 aaPredicted RBP19.11■□□□□ 0.65
HDAC7-220ENST00000471235 SNIP1Q8TAD8 396 aaKnown RBP19.11■□□□□ 0.65
HDAC7-220ENST00000471235 ASB11Q8WXH4 323 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 USP7Q93009 1102 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 OR2A14Q96R47 310 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 GPR22Q99680 433 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 SLC39A1Q9NY26 324 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 FOXJ2Q9P0K8 574 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 SLC39A10Q9ULF5 831 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 MTO1Q9Y2Z2 717 aaKnown RBP19.11■□□□□ 0.65
HDAC7-220ENST00000471235 PCDHGA7Q9Y5G6 932 aa19.11■□□□□ 0.65
HDAC7-220ENST00000471235 MDC1Q14676 2089 aaKnown RBP19.11■□□□□ 0.65
HDAC7-220ENST00000471235 GFYI3L273 518 aa19.1■□□□□ 0.65
HDAC7-220ENST00000471235 ERGP11308 486 aa19.1■□□□□ 0.65
HDAC7-220ENST00000471235 ZNF37AP17032 561 aaPredicted RBP19.1■□□□□ 0.65
HDAC7-220ENST00000471235 SLC5A2P31639 672 aa19.1■□□□□ 0.65
HDAC7-220ENST00000471235 DEKP35659 375 aaKnown RBP19.1■□□□□ 0.65
HDAC7-220ENST00000471235 SH3BP2P78314 561 aa19.1■□□□□ 0.65
HDAC7-220ENST00000471235 KIR2DS3Q14952 304 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms