RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-208	ENST00000470243	PGBD5	Q8N414	524 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	IQUB	Q8NA54	791 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	AVL9	Q8NBF6	648 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	GOLGA5	Q8TBA6	731 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	DUSP19	Q8WTR2	217 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	SMG7	Q92540	1137 aa	Known RBP	4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	TAAR8	Q969N4	342 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	EXOC4	Q96A65	974 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	MIB2	Q96AX9	1013 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	RADIL	Q96JH8	1075 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	DGAT2	Q96PD7	388 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	FCRL4	Q96PJ5	515 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	HGH1	Q9BTY7	390 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	AP1M1	Q9BXS5	423 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	GOLPH3L	Q9H4A5	285 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	UBA2	Q9UBT2	640 aa	Predicted RBP	4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	DNAJB4	Q9UDY4	337 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	PPIE	Q9UNP9	301 aa	Known RBP	4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	ZNF148	Q9UQR1	794 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	KLHL20	Q9Y2M5	609 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	PCDHGA5	Q9Y5G8	931 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	TRPV2	Q9Y5S1	764 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	USP16	Q9Y5T5	823 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	SNX9	Q9Y5X1	595 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	MYH10	P35580	1976 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	ZNF292	O60281	2723 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	MAST4	O15021	2626 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	USP24	Q9UPU5	2620 aa		4.07	□□□□□ -1.76
SRRM1-208	ENST00000470243	ACACB	O00763	2458 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	RIF1	Q5UIP0	2472 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	IGLV5-52	A0A0A0MRZ9	124 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243		A0A0U1RQJ8	604 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243		A6NL46	340 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	FAM90A26	D6RGX4	464 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	HS3ST1	O14792	307 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	STX10	O60499	249 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	DKC1	O60832	514 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	RPS6KA5	O75582	802 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	PSMD10	O75832	226 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	KDM4B	O94953	1096 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	CAMTA2	O94983	1202 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	SMC2	O95347	1197 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	BCL10	O95999	233 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	IVL	P07476	585 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	ABCB1	P08183	1280 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	IGHV4-30-4	P0DP06	118 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	LIG4	P49917	911 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	LINC00205	P59089	165 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	KRTAP10-11	P60412	298 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	PRPF4B	Q13523	1007 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	BAAT	Q14032	418 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	IL11RA	Q14626	422 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	STK38	Q15208	465 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	OASL	Q15646	514 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	C15orf59	Q2T9L4	293 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	RABL6	Q3YEC7	729 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	EFHC1	Q5JVL4	640 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	FAM109B	Q6ICB4	259 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	LCN10	Q6JVE6	187 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	ZNF530	Q6P9A1	599 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	PAPD4	Q6PIY7	484 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	TRIM65	Q6PJ69	517 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	SYT10	Q6XYQ8	523 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	BHLHA9	Q7RTU4	235 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	ZNF589	Q86UQ0	364 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	VSTM4	Q8IW00	320 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	CEP97	Q8IW35	865 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	MCEMP1	Q8IX19	187 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	TMTC2	Q8N394	836 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	SYT2	Q8N9I0	419 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	KBTBD3	Q8NAB2	608 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	POGLUT1	Q8NBL1	392 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	LINC00301	Q8NCQ3	95 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	WFIKKN2	Q8TEU8	576 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	FAM216A	Q8WUB2	273 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	PTPMT1	Q8WUK0	201 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	TMED6	Q8WW62	240 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	SLC44A1	Q8WWI5	657 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	C3orf30	Q96M34	536 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	USP28	Q96RU2	1077 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	CDRT15	Q96T59	188 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	MTERF1	Q99551	399 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	CDX2	Q99626	313 aa	Predicted RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	MRPL1	Q9BYD6	325 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	RTN4R	Q9BZR6	473 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	XPO4	Q9C0E2	1151 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	SIL1	Q9H173	461 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	BICC1	Q9H694	974 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	SLC35C2	Q9NQQ7	365 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	OCIAD1	Q9NX40	245 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	IFNK	Q9P0W0	207 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	GIMAP2	Q9UG22	337 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	HOOK1	Q9UJC3	728 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	TUBE1	Q9UJT0	475 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	DBNL	Q9UJU6	430 aa	Known RBP	4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	FBXL2	Q9UKC9	423 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	PCDHA7	Q9UN72	937 aa		4.06	□□□□□ -1.76
SRRM1-208	ENST00000470243	LOXL2	Q9Y4K0	774 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms