RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 VPS35Q96QK1 796 aa7.83□□□□□ -1.16
LSM2-210ENST00000470086 ALPK1Q96QP1 1244 aa7.83□□□□□ -1.16
LSM2-210ENST00000470086 NPAS2Q99743 824 aa7.83□□□□□ -1.16
LSM2-210ENST00000470086 ZNF559Q9BR84 538 aa7.83□□□□□ -1.16
LSM2-210ENST00000470086 POLR1EQ9GZS1 481 aaKnown RBP7.83□□□□□ -1.16
LSM2-210ENST00000470086 UGT1A7Q9HAW7 530 aa7.83□□□□□ -1.16
LSM2-210ENST00000470086 UGT1A10Q9HAW8 530 aa7.83□□□□□ -1.16
LSM2-210ENST00000470086 UGT1A8Q9HAW9 530 aa7.83□□□□□ -1.16
LSM2-210ENST00000470086 DNAJB12Q9NXW2 375 aaKnown RBP7.83□□□□□ -1.16
LSM2-210ENST00000470086 ICKQ9UPZ9 632 aa7.83□□□□□ -1.16
LSM2-210ENST00000470086 SONP18583 2426 aaKnown RBP7.83□□□□□ -1.16
LSM2-210ENST00000470086 ANKRD66B4E2M5 251 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 VEGFDO43915 354 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 CTAG2O75638 210 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 SMC2O95347 1197 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 IGHEP01854 428 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 UGT2B7P16662 529 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 ADSLP30566 484 aaPredicted RBP7.82□□□□□ -1.16
LSM2-210ENST00000470086 NSFP46459 744 aaKnown RBP7.82□□□□□ -1.16
LSM2-210ENST00000470086 OR1D4P47884 311 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 CDH6P55285 790 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 PTPRCAPQ14761 206 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 RBBP7Q16576 425 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 ZNF658BQ4V348 819 aaPredicted RBP7.82□□□□□ -1.16
LSM2-210ENST00000470086 METRNLQ641Q3 311 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 NCBP2-AS2Q69YL0 99 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 FCRLBQ6BAA4 426 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 ACAD10Q6JQN1 1059 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 SPESP1Q6UW49 350 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 TTLL10Q6ZVT0 673 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 NEK10Q6ZWH5 1172 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 TMC3Q7Z5M5 1100 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 POLNQ7Z5Q5 900 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 AMZ2Q86W34 360 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 HEATR5AQ86XA9 2040 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 CCDC71Q8IV32 467 aaPredicted RBP7.82□□□□□ -1.16
LSM2-210ENST00000470086 VWA5B2Q8N398 1253 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 CNTD1Q8N815 330 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 CA5BP1Q8WTZ4 195 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 PHF10Q8WUB8 498 aaKnown RBP7.82□□□□□ -1.16
LSM2-210ENST00000470086 HDAC10Q969S8 669 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 FKBP10Q96AY3 582 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 HGH1Q9BTY7 390 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 GRIP2Q9C0E4 1043 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.82□□□□□ -1.16
LSM2-210ENST00000470086 CLSTN2Q9H4D0 955 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 SYNPO2LQ9H987 977 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 ACTR10Q9NZ32 417 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 PPT2Q9UMR5 302 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 RNF6Q9Y252 685 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 L3MBTL1Q9Y468 752 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 MEGF8Q7Z7M0 2845 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 MPDZO75970 2070 aa7.82□□□□□ -1.16
LSM2-210ENST00000470086 SCN3AQ9NY46 2000 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 NPIPA5E9PKD4 350 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 BUD23O43709 281 aaKnown RBP7.81□□□□□ -1.16
LSM2-210ENST00000470086 KLHL41O60662 606 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 PRAMEF1O95521 474 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 HPP00738 406 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 IL2RAP01589 272 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 HOXD4P09016 255 aaPredicted RBP7.81□□□□□ -1.16
LSM2-210ENST00000470086 PSMA2P25787 234 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 HOXC12P31275 282 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 PTGER1P34995 402 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 MTIF2P46199 727 aaKnown RBP7.81□□□□□ -1.16
LSM2-210ENST00000470086 KLC1Q07866 573 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 MYBPHQ13203 477 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 OLIG2Q13516 323 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 BECN1Q14457 450 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 DPYSL2Q16555 572 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 MAN2A1Q16706 1144 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 FNBP1LQ5T0N5 605 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 GPRC6AQ5T6X5 926 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 ARMC6Q6NXE6 501 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 TMEM220Q6QAJ8 160 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 TMCO3Q6UWJ1 677 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 PAMR1Q6UXH9 720 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 CEP128Q6ZU80 1094 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 OVCH1Q7RTY7 1134 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 CD163Q86VB7 1156 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 ZNF677Q86XU0 584 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 RAVER1Q8IY67 606 aaKnown RBP7.81□□□□□ -1.16
LSM2-210ENST00000470086 ZZZ3Q8IYH5 903 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 PLPP7Q8NBV4 271 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 ZFPM2Q8WW38 1151 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 SREK1Q8WXA9 508 aaKnown RBP7.81□□□□□ -1.16
LSM2-210ENST00000470086 HSPH1Q92598 858 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 HAS2Q92819 552 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 OR2A14Q96R47 310 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 LMF1Q96S06 567 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 AP1M1Q9BXS5 423 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 SLC26A1Q9H2B4 701 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 NDST4Q9H3R1 872 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 PCDH18Q9HCL0 1135 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 GPAMQ9HCL2 828 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 NLRC4Q9NPP4 1024 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.81□□□□□ -1.16
LSM2-210ENST00000470086 ANKRD10Q9NXR5 420 aa7.81□□□□□ -1.16
LSM2-210ENST00000470086 STOX2Q9P2F5 926 aaPredicted RBP7.81□□□□□ -1.16
LSM2-210ENST00000470086 SERTAD3Q9UJW9 196 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms