RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 MRGPREQ86SM8 312 aa20.32■□□□□ 0.84
COL9A3-207ENST00000467819 SYCE1Q8N0S2 351 aa20.32■□□□□ 0.84
COL9A3-207ENST00000467819 ZNF655Q8N720 491 aaPredicted RBP20.32■□□□□ 0.84
COL9A3-207ENST00000467819 OR13J1Q8NGT2 312 aa20.32■□□□□ 0.84
COL9A3-207ENST00000467819 ATG4AQ8WYN0 398 aa20.32■□□□□ 0.84
COL9A3-207ENST00000467819 HDAC10Q969S8 669 aa20.32■□□□□ 0.84
COL9A3-207ENST00000467819 GBP5Q96PP8 586 aa20.32■□□□□ 0.84
COL9A3-207ENST00000467819 C17orf62Q9BQA9 187 aa20.32■□□□□ 0.84
COL9A3-207ENST00000467819 TXLNGQ9NUQ3 528 aa20.32■□□□□ 0.84
COL9A3-207ENST00000467819 OR6C2Q9NZP2 312 aa20.32■□□□□ 0.84
COL9A3-207ENST00000467819 IFT80Q9P2H3 777 aaPredicted RBP20.32■□□□□ 0.84
COL9A3-207ENST00000467819 SLC2A6Q9UGQ3 507 aa20.32■□□□□ 0.84
COL9A3-207ENST00000467819 NDOR1Q9UHB4 597 aa20.32■□□□□ 0.84
COL9A3-207ENST00000467819 CDYLQ9Y232 598 aa20.32■□□□□ 0.84
COL9A3-207ENST00000467819 TEX15Q9BXT5 2789 aa20.31■□□□□ 0.84
COL9A3-207ENST00000467819 ZSCAN9O15535 394 aaPredicted RBP20.31■□□□□ 0.84
COL9A3-207ENST00000467819 GOT2P00505 430 aaKnown RBP20.31■□□□□ 0.84
COL9A3-207ENST00000467819 PEBP1P30086 187 aaKnown RBP20.31■□□□□ 0.84
COL9A3-207ENST00000467819 FOLR3P41439 243 aa20.31■□□□□ 0.84
COL9A3-207ENST00000467819 FOXL2P58012 376 aa20.31■□□□□ 0.84
COL9A3-207ENST00000467819 CDH17Q12864 832 aa20.31■□□□□ 0.84
COL9A3-207ENST00000467819 HIST2H2BCQ6DN03 193 aa20.31■□□□□ 0.84
COL9A3-207ENST00000467819 PPP1R21Q6ZMI0 780 aa20.31■□□□□ 0.84
COL9A3-207ENST00000467819 HPS6Q86YV9 775 aa20.31■□□□□ 0.84
COL9A3-207ENST00000467819 FAM20CQ8IXL6 584 aa20.31■□□□□ 0.84
COL9A3-207ENST00000467819 SMAD5Q99717 465 aaKnown RBP20.31■□□□□ 0.84
COL9A3-207ENST00000467819 DOCK10Q96BY6 2186 aa20.31■□□□□ 0.84
COL9A3-207ENST00000467819 MDC1Q14676 2089 aaKnown RBP20.3■□□□□ 0.84
COL9A3-207ENST00000467819 HEATR9A2RTY3 570 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 KDM1AO60341 852 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 GAS8O95995 478 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 DCDP81605 110 aaKnown RBP20.3■□□□□ 0.84
COL9A3-207ENST00000467819 PLOD1Q02809 727 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-207ENST00000467819 KIF5AQ12840 1032 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 SSPNQ14714 243 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 SLC5A12Q1EHB4 618 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 LYPLAL1Q5VWZ2 237 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 AFTPHQ6ULP2 937 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 PROKR1Q8TCW9 393 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 PNPLA2Q96AD5 504 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 IP6K3Q96PC2 410 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 BAG1Q99933 345 aaPredicted RBP20.3■□□□□ 0.84
COL9A3-207ENST00000467819 DESI2Q9BSY9 194 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 ETNK1Q9HBU6 452 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 CIDEBQ9UHD4 219 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 KLHL20Q9Y2M5 609 aa20.3■□□□□ 0.84
COL9A3-207ENST00000467819 PEX12O00623 359 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 SEMA7AO75326 666 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 GRIA1P42261 906 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 MRPL49Q13405 166 aaKnown RBP20.29■□□□□ 0.84
COL9A3-207ENST00000467819 KIR2DS3Q14952 304 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 C4orf17Q53FE4 359 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 TSTD2Q5T7W7 516 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 VWA5B1Q5TIE3 1220 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 DNAJC22Q8N4W6 341 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 CLEC1AQ8NC01 280 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 OR6P1Q8NGX9 317 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 FER1L6-AS2Q96M78 137 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 TTC1Q99614 292 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 AP1M1Q9BXS5 423 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 CHRNA10Q9GZZ6 450 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 SRPK3Q9UPE1 567 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 PLCL2Q9UPR0 1127 aa20.29■□□□□ 0.84
COL9A3-207ENST00000467819 ERI2A8K979 691 aaKnown RBP20.28■□□□□ 0.84
COL9A3-207ENST00000467819 TCP11X1B4DZS4 312 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 E7EVH7 732 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 F8W8V4 182 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 MASP2O00187 686 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 CNOT3O75175 753 aaKnown RBP20.28■□□□□ 0.84
COL9A3-207ENST00000467819 IFNB1P01574 187 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 MAGP20916 626 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 PKLRP30613 574 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 CCR7P32248 378 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 HSPA14Q0VDF9 509 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 SEMA3AQ14563 771 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 NKAIN1Q4KMZ8 207 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 TLDC1Q6P9B6 456 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 TAX1BP1Q86VP1 789 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 VRK3Q8IV63 474 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 TMEM151BQ8IW70 566 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 C2orf73Q8N5S3 287 aaPredicted RBP20.28■□□□□ 0.84
COL9A3-207ENST00000467819 LMNTD1Q8N9Z9 388 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 OR2Y1Q8NGV0 311 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 OR4L1Q8NH43 312 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 CFAP61Q8NHU2 1237 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 LKAAEAR1Q8TD35 194 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 SSC4DQ8WTU2 575 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 HES6Q96HZ4 224 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 ZNF778Q96MU6 729 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 NDC1Q9BTX1 674 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 SLC29A3Q9BZD2 475 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 RBSNQ9H1K0 784 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 C5AR2Q9P296 337 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 PLEKHB1Q9UF11 243 aaPredicted RBP20.28■□□□□ 0.84
COL9A3-207ENST00000467819 CAPN6Q9Y6Q1 641 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 UNC79Q9P2D8 2635 aa20.28■□□□□ 0.84
COL9A3-207ENST00000467819 LIASO43766 372 aa20.27■□□□□ 0.84
COL9A3-207ENST00000467819 KRT86O43790 486 aa20.27■□□□□ 0.84
COL9A3-207ENST00000467819 FDFT1P37268 417 aa20.27■□□□□ 0.84
COL9A3-207ENST00000467819 RAB28P51157 221 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms