RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 LMF1Q96S06 567 aa11.72□□□□□ -0.53
UBR4-211ENST00000467272 DNAJC7Q99615 494 aa11.72□□□□□ -0.53
UBR4-211ENST00000467272 MESP1Q9BRJ9 268 aa11.72□□□□□ -0.53
UBR4-211ENST00000467272 HGH1Q9BTY7 390 aa11.72□□□□□ -0.53
UBR4-211ENST00000467272 SLC7A5P2Q9GIP4 190 aa11.72□□□□□ -0.53
UBR4-211ENST00000467272 LHPPQ9H008 270 aa11.72□□□□□ -0.53
UBR4-211ENST00000467272 GBA3Q9H227 469 aa11.72□□□□□ -0.53
UBR4-211ENST00000467272 DDX56Q9NY93 547 aaKnown RBP11.72□□□□□ -0.53
UBR4-211ENST00000467272 ZDHHC3Q9NYG2 299 aa11.72□□□□□ -0.53
UBR4-211ENST00000467272 KLHL8Q9P2G9 620 aaPredicted RBP11.72□□□□□ -0.53
UBR4-211ENST00000467272 COPG2Q9UBF2 871 aa11.72□□□□□ -0.53
UBR4-211ENST00000467272 NDOR1Q9UHB4 597 aa11.72□□□□□ -0.53
UBR4-211ENST00000467272 GPN3Q9UHW5 284 aaPredicted RBP11.72□□□□□ -0.53
UBR4-211ENST00000467272 PKDREJQ9NTG1 2253 aa11.72□□□□□ -0.53
UBR4-211ENST00000467272 NUP210LQ5VU65 1888 aa11.72□□□□□ -0.53
UBR4-211ENST00000467272 MDC1Q14676 2089 aaKnown RBP11.71□□□□□ -0.53
UBR4-211ENST00000467272 A0A0J9YY10 115 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 FITM1A5D6W6 292 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 BHMG1C9JSJ3 638 aaPredicted RBP11.71□□□□□ -0.53
UBR4-211ENST00000467272 PRSS44E7EML9 344 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 IFRD1O00458 451 aaPredicted RBP11.71□□□□□ -0.53
UBR4-211ENST00000467272 KLHL18O94889 574 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 SERPINC1P01008 464 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 RALBP11234 206 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 ACRV1P26436 265 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 SHMT2P34897 504 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 SOX11P35716 441 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 MFAP5Q13361 173 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 TFDP2Q14188 446 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 FJX1Q86VR8 437 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 PIANPQ8IYJ0 282 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 CLDN19Q8N6F1 224 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 CATSPER1Q8NEC5 780 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 PSMF1Q92530 271 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 DCUN1D1Q96GG9 259 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 TRIM8Q9BZR9 551 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 FAM96AQ9H5X1 160 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 MRM3Q9HC36 420 aaKnown RBP11.71□□□□□ -0.53
UBR4-211ENST00000467272 EURLQ9NYK6 297 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 PLCL2Q9UPR0 1127 aa11.71□□□□□ -0.53
UBR4-211ENST00000467272 CCDC88CQ9P219 2028 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 SVILO95425 2214 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 hCG_1818297A0A087WSY0 165 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 A0A1B0GX78 115 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 SLC5A10A0PJK1 596 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 HACD1B0YJ81 288 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 JRKO75564 520 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 ANXA9O76027 345 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 PRSS56P0CW18 603 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 CDC16Q13042 620 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 KIR2DS3Q14952 304 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 ZNF630Q2M218 657 aaPredicted RBP11.7□□□□□ -0.54
UBR4-211ENST00000467272 ZC3H18Q86VM9 953 aaKnown RBP11.7□□□□□ -0.54
UBR4-211ENST00000467272 TBC1D21Q8IYX1 336 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 ZNF295-AS1Q8N0V1 137 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 BCORP1Q8N888 145 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 LINC01555Q8NAE3 123 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 OR5K2Q8NHB8 316 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 FSD1LQ9BXM9 530 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 DEF6Q9H4E7 631 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 OLAHQ9NV23 265 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 CRLS1Q9UJA2 301 aa11.7□□□□□ -0.54
UBR4-211ENST00000467272 ZNF469Q96JG9 3925 aaPredicted RBP11.69□□□□□ -0.54
UBR4-211ENST00000467272 ZGRF1Q86YA3 2104 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 CFAP99D6REC4 459 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 CCL22O00626 93 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 LIN7AO14910 233 aaPredicted RBP11.69□□□□□ -0.54
UBR4-211ENST00000467272 AP2A2O94973 939 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 CRTAMO95727 393 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 AP2A1O95782 977 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 MBD3O95983 291 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 ITGALP20701 1170 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 COMTP21964 271 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 TNFSF10P50591 281 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 GEMP55040 296 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 GRB7Q14451 532 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 INAQ16352 499 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 ZXDCQ2QGD7 858 aaPredicted RBP11.69□□□□□ -0.54
UBR4-211ENST00000467272 TFDP3Q5H9I0 405 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 ATG9BQ674R7 924 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 ISLR2Q6UXK2 745 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 BNC2Q6ZN30 1099 aaPredicted RBP11.69□□□□□ -0.54
UBR4-211ENST00000467272 SERPINA9Q86WD7 417 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 MCATQ8IVS2 390 aaKnown RBP11.69□□□□□ -0.54
UBR4-211ENST00000467272 RHOT2Q8IXI1 618 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 KATNAL2Q8IYT4 538 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 ACBD4Q8NC06 268 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.69□□□□□ -0.54
UBR4-211ENST00000467272 NR4A3Q92570 626 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 P3H4Q92791 437 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 APOL2Q9BQE5 337 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 NDC1Q9BTX1 674 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 C10orf88Q9H8K7 445 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 CTSFQ9UBX1 484 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 POLG2Q9UHN1 485 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 RSPH14Q9UHP6 348 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 CDC23Q9UJX2 597 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 HYOU1Q9Y4L1 999 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 KLK4Q9Y5K2 254 aa11.69□□□□□ -0.54
UBR4-211ENST00000467272 GTF3C3Q9Y5Q9 886 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms