RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 SMC4Q9NTJ3 1288 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 THEGQ9P2T0 379 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 GTF2A1LQ9UNN4 478 aa2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 ZNF646O15015 1829 aaPredicted RBP2.38□□□□□ -2.03
GTF3C3-209ENST00000466862 PAPSS1O43252 624 aaPredicted RBP2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 RNASEH2AO75792 299 aaKnown RBP2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 VTNP04004 478 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 RB1P06400 928 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 ACADMP11310 421 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 CDH8P55286 799 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 CSNK2BP67870 215 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 PRAMEP78395 509 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 CYCSP99999 105 aaKnown RBP2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 MPP1Q00013 466 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 SQLEQ14534 574 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 TNIP1Q15025 636 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 WLSQ5T9L3 541 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 CHST9Q7L1S5 443 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 HPS6Q86YV9 775 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 TMTC2Q8N394 836 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 PDILTQ8N807 584 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 NPEPL1Q8NDH3 523 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 OR1L3Q8NH93 324 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 C11orf45Q8TAV5 145 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 RASL10AQ92737 203 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 LRRC59Q96AG4 307 aaKnown RBP2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 RTN4RQ9BZR6 473 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 OR2B2Q9GZK3 357 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 S1PR5Q9H228 398 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 DIAPH3Q9NSV4 1193 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 WSB2Q9NYS7 404 aaPredicted RBP2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 ZHX1Q9UKY1 873 aaPredicted RBP2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 RARRES3Q9UL19 164 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 KLF2Q9Y5W3 355 aaPredicted RBP2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 ZNF541Q9H0D2 1346 aa2.37□□□□□ -2.03
GTF3C3-209ENST00000466862 MAGEC1O60732 1142 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 FOLR2P14207 255 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 BCL3P20749 454 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 IL4RP24394 825 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 MAPK4P31152 587 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 ACSL1P33121 698 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 PPARGP37231 505 aaPredicted RBP2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 MAZP56270 477 aaKnown RBP2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 HERV-K104P61576 105 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 TRA2BP62995 288 aaKnown RBP2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 KCNC3Q14003 757 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 MOGAT2Q3SYC2 334 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 PHLDA2Q53GA4 152 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 TMEM207Q6UWW9 146 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 KIF6Q6ZMV9 814 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 HAUS6Q7Z4H7 955 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 TMEM139Q8IV31 216 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 ZNF584Q8IVC4 421 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 ARHGAP24Q8N264 748 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 NIPA2Q8N8Q9 360 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 OR11H4Q8NGC9 324 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 VANGL1Q8TAA9 524 aaPredicted RBP2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 ZNF486Q96H40 463 aaPredicted RBP2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 NCAPGQ9BPX3 1015 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 LMF2Q9BU23 707 aaKnown RBP2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 NUP85Q9BW27 656 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 PANK3Q9H999 370 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 SPHK2Q9NRA0 654 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 P4HTMQ9NXG6 502 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 LARSQ9P2J5 1176 aaKnown RBP2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 MUTYHQ9UIF7 546 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 DAPK2Q9UIK4 370 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 MAN1B1Q9UKM7 699 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 TNNQ9UQP3 1299 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 GRIP1Q9Y3R0 1128 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 PCDH11YQ9BZA8 1340 aa2.36□□□□□ -2.03
GTF3C3-209ENST00000466862 IGLV3-10A0A075B6K4 115 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 TMEM221A6NGB7 291 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 KLLNB2CW77 178 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 PI4K2BG5E9Z4 385 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 GLRA3O75311 464 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 MED24O75448 989 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 ITIH1P19827 911 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 CHMP24386 653 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 TMEM50BP56557 158 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 CDK3Q00526 305 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 PEX6Q13608 980 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 MTF1Q14872 753 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 NR1D2Q14995 579 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 HSP90AB4PQ58FF6 505 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 C20orf194Q5TEA3 1177 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 FIGLAQ6QHK4 219 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 TMPRSS11FQ6ZWK6 438 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 IKBIPQ70UQ0 350 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 RTN4RL2Q86UN3 420 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 AACSQ86V21 672 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 C11orf53Q8IXP5 236 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 TEX11Q8IYF3 940 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 OR5M8Q8NGP6 311 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 LRRC15Q8TF66 581 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 GAL3ST4Q96RP7 486 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 KIFC3Q9BVG8 833 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 TEX10Q9NXF1 929 aaPredicted RBP2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 NDE1Q9NXR1 346 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 SPHK1Q9NYA1 384 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms