RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 FMO4P31512 558 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 RORAP35398 523 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 MAGEA3P43357 314 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 SARNPP82979 210 aaKnown RBP21.03■□□□□ 0.96
LIME1-203ENST00000465591 KCNAB2Q13303 367 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 DEFB110Q30KQ9 67 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 CASC4Q6P4E1 433 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 CENPUQ71F23 418 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 LRRC6Q86X45 466 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 C2orf73Q8N5S3 287 aaPredicted RBP21.03■□□□□ 0.96
LIME1-203ENST00000465591 NAT8LQ8N9F0 302 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 MR1Q95460 341 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 FAM136AQ96C01 138 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 PANX3Q96QZ0 392 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 CHST8Q9H2A9 424 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 ADNPQ9H2P0 1102 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 FANCEQ9HB96 536 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 GALPQ9UBC7 116 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 CRYL1Q9Y2S2 319 aa21.03■□□□□ 0.96
LIME1-203ENST00000465591 A0A0J9YY10 115 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 CDC14CA4D256 554 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 H3BMH7 237 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 PYCARD-AS1I3L0S3 204 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 KIF5CO60282 957 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 MLNP12872 115 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 FNTAP49354 379 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 RAB28P51157 221 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 TMED2Q15363 201 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 CCSMST1Q4G0I0 132 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 ANKRD20A4Q4UJ75 823 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 MRNIPQ6NTE8 343 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 UNC5DQ6UXZ4 953 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 TAX1BP1Q86VP1 789 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 DCUN1D3Q8IWE4 304 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 DSELQ8IZU8 1212 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 ZNF669Q96BR6 464 aaPredicted RBP21.02■□□□□ 0.96
LIME1-203ENST00000465591 LRFN5Q96NI6 719 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 SLC25A18Q9H1K4 315 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 SYTL2Q9HCH5 934 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 PCMTD2Q9NV79 361 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 KLHL20Q9Y2M5 609 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 KCNMB2Q9Y691 235 aa21.02■□□□□ 0.96
LIME1-203ENST00000465591 ZCWPW2A0A1B0GU75 182 aa21.01■□□□□ 0.95
LIME1-203ENST00000465591 FAM237BA0A1B0GVD1 139 aa21.01■□□□□ 0.95
LIME1-203ENST00000465591 SDR42E2A6NKP2 422 aa21.01■□□□□ 0.95
LIME1-203ENST00000465591 ISM1B1AKI9 464 aa21.01■□□□□ 0.95
LIME1-203ENST00000465591 MEN1O00255 615 aa21.01■□□□□ 0.95
LIME1-203ENST00000465591 OGNP20774 298 aaKnown RBP21.01■□□□□ 0.95
LIME1-203ENST00000465591 PTPN4P29074 926 aa21.01■□□□□ 0.95
LIME1-203ENST00000465591 BDKRB1P46663 353 aa21.01■□□□□ 0.95
LIME1-203ENST00000465591 DHX34Q14147 1143 aaKnown RBP21.01■□□□□ 0.95
LIME1-203ENST00000465591 SLC5A12Q1EHB4 618 aa21.01■□□□□ 0.95
LIME1-203ENST00000465591 FAM69BQ5VUD6 431 aa21.01■□□□□ 0.95
LIME1-203ENST00000465591 NEPROQ6NW34 567 aa21.01■□□□□ 0.95
LIME1-203ENST00000465591 OTOAQ7RTW8 1153 aa21.01■□□□□ 0.95
LIME1-203ENST00000465591 SDCCAG8Q86SQ7 713 aaPredicted RBP21.01■□□□□ 0.95
LIME1-203ENST00000465591 CILP2Q8IUL8 1156 aa21.01■□□□□ 0.95
LIME1-203ENST00000465591 APOBEC4Q8WW27 367 aaKnown RBP21.01■□□□□ 0.95
LIME1-203ENST00000465591 ACTR5Q9H9F9 607 aaPredicted RBP21.01■□□□□ 0.95
LIME1-203ENST00000465591 XAB2Q9HCS7 855 aaKnown RBP21.01■□□□□ 0.95
LIME1-203ENST00000465591 TSR3Q9UJK0 312 aaKnown RBP21.01■□□□□ 0.95
LIME1-203ENST00000465591 CES2O00748 559 aa21■□□□□ 0.95
LIME1-203ENST00000465591 CAPN1P07384 714 aa21■□□□□ 0.95
LIME1-203ENST00000465591 SFTPCP11686 197 aa21■□□□□ 0.95
LIME1-203ENST00000465591 CYP2A7P20853 494 aa21■□□□□ 0.95
LIME1-203ENST00000465591 CD9P21926 228 aa21■□□□□ 0.95
LIME1-203ENST00000465591 ITGA1P56199 1179 aa21■□□□□ 0.95
LIME1-203ENST00000465591 IL10RAQ13651 578 aa21■□□□□ 0.95
LIME1-203ENST00000465591 GBX1Q14549 363 aa21■□□□□ 0.95
LIME1-203ENST00000465591 KIR2DS3Q14952 304 aa21■□□□□ 0.95
LIME1-203ENST00000465591 PTCHD3Q3KNS1 767 aa21■□□□□ 0.95
LIME1-203ENST00000465591 ARMC3Q5W041 872 aa21■□□□□ 0.95
LIME1-203ENST00000465591 HOOK3Q86VS8 718 aa21■□□□□ 0.95
LIME1-203ENST00000465591 DENND6AQ8IWF6 608 aa21■□□□□ 0.95
LIME1-203ENST00000465591 CLIP3Q96DZ5 547 aa21■□□□□ 0.95
LIME1-203ENST00000465591 TCTN2Q96GX1 697 aa21■□□□□ 0.95
LIME1-203ENST00000465591 SIGLEC10Q96LC7 697 aa21■□□□□ 0.95
LIME1-203ENST00000465591 TCF12Q99081 682 aa21■□□□□ 0.95
LIME1-203ENST00000465591 SPRTNQ9H040 489 aaPredicted RBP21■□□□□ 0.95
LIME1-203ENST00000465591 DDX47Q9H0S4 455 aaKnown RBP21■□□□□ 0.95
LIME1-203ENST00000465591 SAMD15Q9P1V8 674 aa21■□□□□ 0.95
LIME1-203ENST00000465591 SERTAD3Q9UJW9 196 aa21■□□□□ 0.95
LIME1-203ENST00000465591 PCM1Q15154 2024 aa21■□□□□ 0.95
LIME1-203ENST00000465591 ZNF749O43361 778 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 SLC28A2O43868 658 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 C1orf105O95561 183 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 S1PR4O95977 384 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 PAMP19021 973 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 ADARP55265 1226 aaKnown RBP20.99■□□□□ 0.95
LIME1-203ENST00000465591 RNF187Q5TA31 235 aaPredicted RBP20.99■□□□□ 0.95
LIME1-203ENST00000465591 RNASEH2BQ5TBB1 312 aaKnown RBP20.99■□□□□ 0.95
LIME1-203ENST00000465591 ZNF385CQ66K41 422 aaPredicted RBP20.99■□□□□ 0.95
LIME1-203ENST00000465591 CNSTQ6PJW8 725 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 FAM198BQ6UWH4 519 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 SYTL1Q8IYJ3 562 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 DNAJC22Q8N4W6 341 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 OR2L8Q8NGY9 312 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 GPR87Q9BY21 358 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 CHRNA10Q9GZZ6 450 aa20.99■□□□□ 0.95
LIME1-203ENST00000465591 TUBD1Q9UJT1 453 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms