RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 SPHK1Q9NYA1 384 aa11.62□□□□□ -0.55
TMCO3-205ENST00000465556 CIDEBQ9UHD4 219 aa11.62□□□□□ -0.55
TMCO3-205ENST00000465556 PCYOX1Q9UHG3 505 aa11.62□□□□□ -0.55
TMCO3-205ENST00000465556 RUVBL2Q9Y230 463 aaKnown RBP11.62□□□□□ -0.55
TMCO3-205ENST00000465556 VPS9D1Q9Y2B5 631 aa11.62□□□□□ -0.55
TMCO3-205ENST00000465556 MRPS18BQ9Y676 258 aaKnown RBP11.62□□□□□ -0.55
TMCO3-205ENST00000465556 MAD1L1Q9Y6D9 718 aa11.62□□□□□ -0.55
TMCO3-205ENST00000465556 TNRC6AQ8NDV7 1962 aaKnown RBP11.61□□□□□ -0.55
TMCO3-205ENST00000465556 ZCWPW2A0A1B0GU75 182 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 MAGEB16A2A368 324 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 TMEM150CB9EJG8 249 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 DNALI1O14645 258 aaPredicted RBP11.61□□□□□ -0.55
TMCO3-205ENST00000465556 NKX2-8O15522 239 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 MAP3K7O43318 606 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 NTRK1P04629 796 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 F7P08709 466 aaPredicted RBP11.61□□□□□ -0.55
TMCO3-205ENST00000465556 FAM87AP0C7U9 286 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 ATP5DP30049 168 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 PTGIRP43119 386 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 BDKRB1P46663 353 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 MC1RQ01726 317 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 C19orf57Q0VDD7 668 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 GPS2Q13227 327 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 GRB7Q14451 532 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 GBX1Q14549 363 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 KIR2DS3Q14952 304 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 KYNUQ16719 465 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 SLC5A12Q1EHB4 618 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 CRTC2Q53ET0 693 aaPredicted RBP11.61□□□□□ -0.55
TMCO3-205ENST00000465556 ZNF789Q5FWF6 425 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 ATP1A1-AS1Q5TC04 95 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 BORAQ6PGQ7 559 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 CDHR3Q6ZTQ4 885 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 DENND6AQ8IWF6 608 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 EXD3Q8N9H8 876 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 LINC01555Q8NAE3 123 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 OR1L3Q8NH93 324 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 SKA2Q8WVK7 121 aaPredicted RBP11.61□□□□□ -0.55
TMCO3-205ENST00000465556 FAM136AQ96C01 138 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 SIGLEC10Q96LC7 697 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 CATSPER2Q96P56 530 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 IL17FQ96PD4 163 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 ARHGAP9Q9BRR9 750 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 KCND1Q9NSA2 647 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 INTS10Q9NVR2 710 aaKnown RBP11.61□□□□□ -0.55
TMCO3-205ENST00000465556 PADI1Q9ULC6 663 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 CRYL1Q9Y2S2 319 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 PCDHB3Q9Y5E6 796 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 PCDHGA6Q9Y5G7 932 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 NFS1Q9Y697 457 aa11.61□□□□□ -0.55
TMCO3-205ENST00000465556 CTAGE9A4FU28 777 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 C21orf140B9A014 251 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 FANCGO15287 622 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 C1orf105O95561 183 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 CCNYL3P0C7X3 344 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 PKMP14618 531 aaKnown RBP11.6□□□□□ -0.55
TMCO3-205ENST00000465556 TCN2P20062 427 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 CYP2A7P20853 494 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 SLC1A2P43004 574 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 ITGA1P56199 1179 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 THOC5Q13769 683 aaKnown RBP11.6□□□□□ -0.55
TMCO3-205ENST00000465556 ZIC1Q15915 447 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 LONRF1Q17RB8 773 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 DEFB110Q30KQ9 67 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 PRAMEF17Q5VTA0 474 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 IZUMO3Q5VZ72 239 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 CNSTQ6PJW8 725 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 TAX1BP1Q86VP1 789 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 CREG2Q8IUH2 290 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 ZBTB2Q8N680 514 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 OR2L8Q8NGY9 312 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 LRFN5Q96NI6 719 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 RAB11FIP5Q9BXF6 653 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 CHRNA10Q9GZZ6 450 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 FBXO6Q9NRD1 293 aaPredicted RBP11.6□□□□□ -0.55
TMCO3-205ENST00000465556 TSR3Q9UJK0 312 aaKnown RBP11.6□□□□□ -0.55
TMCO3-205ENST00000465556 KCND3Q9UK17 655 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 SAR1BQ9Y6B6 198 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 NBASA2RRP1 2371 aa11.6□□□□□ -0.55
TMCO3-205ENST00000465556 KRT87PA6NCN2 255 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 ISM1B1AKI9 464 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 E5RI56 91 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 RASGRF2O14827 1237 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 KATNA1O75449 491 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 BANF1O75531 89 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 S1PR4O95977 384 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 PGAM1P18669 254 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 CD9P21926 228 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 IVDP26440 423 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 RORAP35398 523 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 POLE2P56282 527 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 MPP1Q00013 466 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 DHX9Q08211 1270 aaKnown RBP11.59□□□□□ -0.55
TMCO3-205ENST00000465556 CTBP1Q13363 440 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 CRYMQ14894 314 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 C16orf46Q6P387 395 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 ZNF517Q6ZMY9 492 aaPredicted RBP11.59□□□□□ -0.55
TMCO3-205ENST00000465556 KLHL7Q8IXQ5 586 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 LMNTD2Q8IXW0 634 aa11.59□□□□□ -0.55
TMCO3-205ENST00000465556 LMNTD1Q8N9Z9 388 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms