RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 DEPDC1BQ8WUY9 529 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 CCDC107Q8WV48 283 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 SSMEM1Q8WWF3 244 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 NR4A3Q92570 626 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 SYN2Q92777 582 aaPredicted RBP3.84□□□□□ -1.79
CLK1-208ENST00000464454 EXT2Q93063 718 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 MOB3AQ96BX8 217 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 DHX58Q96C10 678 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 ST6GAL2Q96JF0 529 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 FERMT1Q9BQL6 677 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 MGME1Q9BQP7 344 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 VN1R1Q9GZP7 353 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 ZBTB20Q9HC78 741 aaPredicted RBP3.84□□□□□ -1.79
CLK1-208ENST00000464454 SDF2L1Q9HCN8 221 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 SERINC1Q9NRX5 453 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 PTTG2Q9NZH5 202 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 TBC1D7Q9P0N9 293 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 B3GAT1Q9P2W7 334 aa3.84□□□□□ -1.79
CLK1-208ENST00000464454 A0A087WYN8 130 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 ARHGEF37A1IGU5 675 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 E9PI62 339 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 PRKNO60260 465 aaPredicted RBP3.83□□□□□ -1.8
CLK1-208ENST00000464454 SYNCRIPO60506 623 aaKnown RBP3.83□□□□□ -1.8
CLK1-208ENST00000464454 RNASEH1O60930 286 aaKnown RBP3.83□□□□□ -1.8
CLK1-208ENST00000464454 MPZP25189 248 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 PSMA3P25788 255 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 HOXC13P31276 330 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 LHX1P48742 406 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 NPY4RP50391 375 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 THOP1P52888 689 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 CAPZA1P52907 286 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 MAPK12P53778 367 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 CX3CL1P78423 397 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 BFSP1Q12934 665 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 DMP1Q13316 513 aaPredicted RBP3.83□□□□□ -1.8
CLK1-208ENST00000464454 SYT14P1Q58G82 188 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 C6orf136Q5SQH8 315 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 C11orf63Q6NUN7 778 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 TRAT1Q6PIZ9 186 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 MEX3BQ6ZN04 569 aaKnown RBP3.83□□□□□ -1.8
CLK1-208ENST00000464454 TMPRSS11BQ86T26 416 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 CFAP206Q8IYR0 622 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 OR8H3Q8N146 312 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 CNBD1Q8NA66 436 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 ZNF473Q8WTR7 871 aaKnown RBP3.83□□□□□ -1.8
CLK1-208ENST00000464454 FAM162AQ96A26 154 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 RMDN2Q96LZ7 410 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 MUS81Q96NY9 551 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 CPNE1Q99829 537 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 CITED2Q99967 270 aaPredicted RBP3.83□□□□□ -1.8
CLK1-208ENST00000464454 TRAF4Q9BUZ4 470 aaPredicted RBP3.83□□□□□ -1.8
CLK1-208ENST00000464454 ARRDC1-AS1Q9H2J1 176 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 TFB2MQ9H5Q4 396 aaKnown RBP3.83□□□□□ -1.8
CLK1-208ENST00000464454 GRPEL1Q9HAV7 217 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 MRGBPQ9NV56 204 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 LRWD1Q9UFC0 647 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 GTF3C4Q9UKN8 822 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 RNF150Q9ULK6 438 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 SLC7A7Q9UM01 511 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 NOL7Q9UMY1 257 aaKnown RBP3.83□□□□□ -1.8
CLK1-208ENST00000464454 JRKLQ9Y4A0 524 aa3.83□□□□□ -1.8
CLK1-208ENST00000464454 SOS1Q07889 1333 aaPredicted RBP3.83□□□□□ -1.8
CLK1-208ENST00000464454 FAM170AA1A519 330 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 GAPDHSO14556 408 aaPredicted RBP3.82□□□□□ -1.8
CLK1-208ENST00000464454 GRID2O43424 1007 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 CAVIN2O95810 425 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 INHBAP08476 426 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 SMIM18P0DKX4 95 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 SAGP10523 405 aaPredicted RBP3.82□□□□□ -1.8
CLK1-208ENST00000464454 MSH3P20585 1137 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 CDKN1AP38936 164 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 BMXP51813 675 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 MAT1AQ00266 395 aaKnown RBP3.82□□□□□ -1.8
CLK1-208ENST00000464454 ELFN2Q5R3F8 820 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 CAVIN1Q6NZI2 390 aaKnown RBP3.82□□□□□ -1.8
CLK1-208ENST00000464454 SLC27A1Q6PCB7 646 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 SHQ1Q6PI26 577 aaKnown RBP3.82□□□□□ -1.8
CLK1-208ENST00000464454 CORO6Q6QEF8 472 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 C11orf57Q6ZUT1 292 aaPredicted RBP3.82□□□□□ -1.8
CLK1-208ENST00000464454 MARK2Q7KZI7 788 aaKnown RBP3.82□□□□□ -1.8
CLK1-208ENST00000464454 GLRX5Q86SX6 157 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 ZNF554Q86TJ5 538 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 TLK2Q86UE8 772 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 NUDT13Q86X67 352 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 PLD3Q8IV08 490 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 CIARTQ8N365 385 aaPredicted RBP3.82□□□□□ -1.8
CLK1-208ENST00000464454 TRIML1Q8N9V2 468 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 OR2T12Q8NG77 320 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 OR13J1Q8NGT2 312 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 GOT1L1Q8NHS2 421 aaPredicted RBP3.82□□□□□ -1.8
CLK1-208ENST00000464454 FGFBP3Q8TAT2 258 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 GRAPLQ8TC17 118 aaPredicted RBP3.82□□□□□ -1.8
CLK1-208ENST00000464454 IRGQQ8WZA9 623 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 ALG14Q96F25 216 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 STAMBPL1Q96FJ0 436 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 OTUB1Q96FW1 271 aaPredicted RBP3.82□□□□□ -1.8
CLK1-208ENST00000464454 ZNF354BQ96LW1 612 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 MYADMQ96S97 322 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 RTP3Q9BQQ7 232 aa3.82□□□□□ -1.8
CLK1-208ENST00000464454 THUMPD3Q9BV44 507 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms