RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 PMS2P1A4D2B8 440 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 A8MU76 341 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 PKLRP30613 574 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 SHMT2P34897 504 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 C16orf72Q14CZ0 275 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 SNAP47Q5SQN1 464 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 PHF19Q5T6S3 580 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 IRGCQ6NXR0 463 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 KLHL35Q6PF15 583 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 UBE2R2Q712K3 238 aaPredicted RBP18.35■□□□□ 0.53
LMNB1-204ENST00000463908 CMC1Q7Z7K0 106 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 OOSP2Q86WS3 158 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 FBXO15Q8NCQ5 510 aaPredicted RBP18.35■□□□□ 0.53
LMNB1-204ENST00000463908 FLVCR1-AS1Q8TAF5 88 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 GRAMD1AQ96CP6 724 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 PPM1MQ96MI6 270 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 PKP4Q99569 1192 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 SLC12A9Q9BXP2 914 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 SYTL2Q9HCH5 934 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 GPAMQ9HCL2 828 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 SPHK1Q9NYA1 384 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 KLHL3Q9UH77 587 aa18.35■□□□□ 0.53
LMNB1-204ENST00000463908 TMX2-CTNND1H3BSU7 103 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 MYO1CO00159 1063 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 AGRPO00253 132 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 RASGRF2O14827 1237 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 ZBTB14O43829 449 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 CATP04040 527 aaKnown RBP18.34■□□□□ 0.53
LMNB1-204ENST00000463908 STMN1P16949 149 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 PEBP1P30086 187 aaKnown RBP18.34■□□□□ 0.53
LMNB1-204ENST00000463908 MSH2P43246 934 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 RAB28P51157 221 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 KPNA2P52292 529 aaKnown RBP18.34■□□□□ 0.53
LMNB1-204ENST00000463908 SLC12A2P55011 1212 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 RAB10P61026 200 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 LRRC8EQ6NSJ5 796 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 TTC23LQ6PF05 361 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 FAM92BQ6ZTR7 304 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 MYO1HQ8N1T3 1032 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 SPATA6LQ8N4H0 392 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 NKAPQ8N5F7 415 aaKnown RBP18.34■□□□□ 0.53
LMNB1-204ENST00000463908 C2orf73Q8N5S3 287 aaPredicted RBP18.34■□□□□ 0.53
LMNB1-204ENST00000463908 OR9A1PQ8NGU1 263 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 MAGEC3Q8TD91 643 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 UBLCP1Q8WVY7 318 aaPredicted RBP18.34■□□□□ 0.53
LMNB1-204ENST00000463908 TSPAN17Q96FV3 270 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 ZDHHC12Q96GR4 267 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 LIN37Q96GY3 246 aaPredicted RBP18.34■□□□□ 0.53
LMNB1-204ENST00000463908 PRR11Q96HE9 360 aaPredicted RBP18.34■□□□□ 0.53
LMNB1-204ENST00000463908 UBXN10Q96LJ8 280 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 OR6C2Q9NZP2 312 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 SEMA5BQ9P283 1151 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 ANGPTL2Q9UKU9 493 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 PDE10AQ9Y233 779 aa18.34■□□□□ 0.53
LMNB1-204ENST00000463908 ZZEF1O43149 2961 aa18.33■□□□□ 0.53
LMNB1-204ENST00000463908 EXOC1LA0A1B0GW35 172 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 TRABD2BA6NFA1 517 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 CDC7O00311 574 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 SLC16A5O15375 505 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 PRICKLE3O43900 615 aaPredicted RBP18.33■□□□□ 0.52
LMNB1-204ENST00000463908 SHBGP04278 402 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 CHRM5P08912 532 aaPredicted RBP18.33■□□□□ 0.52
LMNB1-204ENST00000463908 SLC35E2BP0CK96 405 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 PRDX3P30048 256 aaKnown RBP18.33■□□□□ 0.52
LMNB1-204ENST00000463908 LSSP48449 732 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 TRA2AQ13595 282 aaKnown RBP eCLIP18.33■□□□□ 0.52
LMNB1-204ENST00000463908 PHKG1Q16816 387 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 FBXO38Q6PIJ6 1188 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 OR2L8Q8NGY9 312 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 OR2A14Q96R47 310 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 MAP3K3Q99759 626 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 ACTR10Q9NZ32 417 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 ZNF180Q9UJW8 692 aa18.33■□□□□ 0.52
LMNB1-204ENST00000463908 IGHV5-51A0A0C4DH38 117 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 ALDOAP04075 364 aaKnown RBP18.32■□□□□ 0.52
LMNB1-204ENST00000463908 C8GP07360 202 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 INHBAP08476 426 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 CCDC166P0CW27 439 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 ERGP11308 486 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 HGFP14210 728 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 HSD17B3P37058 310 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 DLG1Q12959 904 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 FASTKQ14296 549 aaKnown RBP18.32■□□□□ 0.52
LMNB1-204ENST00000463908 CYP2A13Q16696 494 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 CACHD1Q5VU97 1274 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 ARMC6Q6NXE6 501 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 EMBQ6PCB8 327 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 ADGRD1Q6QNK2 874 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 HMGCLL1Q8TB92 370 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 KLHL6Q8WZ60 621 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 ANKRD7Q92527 254 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 CAVIN3Q969G5 261 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 UNKQ9C0B0 810 aaKnown RBP18.32■□□□□ 0.52
LMNB1-204ENST00000463908 STRADBQ9C0K7 418 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 ZMYND15Q9H091 742 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 PARVBQ9HBI1 364 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 POMT2Q9UKY4 750 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 SATB2Q9UPW6 733 aa18.32■□□□□ 0.52
LMNB1-204ENST00000463908 CCDC187A0A096LP49 1063 aa18.31■□□□□ 0.52
LMNB1-204ENST00000463908 PIPSLA2A3N6 862 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms