RNA–Protein interactions for RNA: ENST00000463687.1

VPS8-216, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-216ENST00000463687 LYSMD4Q5XG99 296 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 ATG16L1Q676U5 607 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 LAIR1Q6GTX8 287 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 NEK5Q6P3R8 708 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 BRAT1Q6PJG6 821 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 SLC13A5Q86YT5 568 aaPredicted RBP6.75□□□□□ -1.33
VPS8-216ENST00000463687 CAMK1DQ8IU85 385 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 TMEFF1Q8IYR6 380 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 PGBD5Q8N414 524 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 KYQ8NBH2 561 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 FAM46DQ8NEK8 389 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 OR2T34Q8NGX1 318 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 ACTL9Q8TC94 416 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 HTR3CQ8WXA8 447 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 RAB7BQ96AH8 199 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 VOPP1Q96AW1 172 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 ARRDC3Q96B67 414 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 HAUS1Q96CS2 278 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 KLHL32Q96NJ5 620 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 VAT1Q99536 393 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 IL12RB2Q99665 862 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 SYT3Q9BQG1 590 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 NDC1Q9BTX1 674 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 FRMD8P1Q9BZ68 369 aaPredicted RBP6.75□□□□□ -1.33
VPS8-216ENST00000463687 ATP13A3Q9H7F0 1226 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 CHODLQ9H9P2 273 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 NT5MQ9NPB1 228 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 NCDNQ9UBB6 729 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 SERGEFQ9UGK8 458 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 SLC23A1Q9UHI7 598 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 C19orf53Q9UNZ5 99 aaPredicted RBP6.75□□□□□ -1.33
VPS8-216ENST00000463687 PCDHGA5Q9Y5G8 931 aa6.75□□□□□ -1.33
VPS8-216ENST00000463687 OAS3Q9Y6K5 1087 aaKnown RBP6.75□□□□□ -1.33
VPS8-216ENST00000463687 CACNA1HO95180 2353 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 HELZP42694 1942 aaKnown RBP6.74□□□□□ -1.33
VPS8-216ENST00000463687 TBC1D3DA0A087WVF3 549 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 TBC1D3IA0A087WXS9 549 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 TBC1D3EA0A087X179 549 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 TBC1D3KA0A087X1G2 549 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 TSPAN11A1L157 253 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 TBC1D3FA6NER0 549 aaPredicted RBP6.74□□□□□ -1.33
VPS8-216ENST00000463687 FAM47DPA6NHR8 397 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 USP27XA6NNY8 438 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 EFCAB8A8MWE9 144 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 TBC1D3LB9A6J9 549 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 E7EVH7 732 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 H7C0C1 242 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 HRKO00198 91 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 PLK4O00444 970 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 TRAFD1O14545 582 aaPredicted RBP6.74□□□□□ -1.33
VPS8-216ENST00000463687 SOCS5O75159 536 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 EPN2O95208 641 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 PIGNO95427 931 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 VIPP01282 170 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 HLA-DQB2P05538 268 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 SERPINF2P08697 491 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 TBC1D3HP0C7X1 549 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 ADRB3P13945 408 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 NFKBIAP25963 317 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 PTPN3P26045 913 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 RBL1P28749 1068 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 NUDT1P36639 197 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 MC3RP41968 323 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 PTGER3P43115 390 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 ATP5OP48047 213 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 DHPSP49366 369 aaPredicted RBP6.74□□□□□ -1.33
VPS8-216ENST00000463687 GZMKP49863 264 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 EIF3EP60228 445 aaKnown RBP6.74□□□□□ -1.33
VPS8-216ENST00000463687 GNG11P61952 73 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 POLR2LP62875 67 aaKnown RBP6.74□□□□□ -1.33
VPS8-216ENST00000463687 ZBTB17Q13105 803 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 TSTQ16762 297 aaKnown RBP6.74□□□□□ -1.33
VPS8-216ENST00000463687 UGP2Q16851 508 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 PLA1AQ53H76 456 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 CACHD1Q5VU97 1274 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 KIAA0895LQ68EN5 471 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 TBC1D3GQ6DHY5 549 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 TBC1D3CQ6IPX1 549 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 PARS2Q7L3T8 475 aaKnown RBP6.74□□□□□ -1.33
VPS8-216ENST00000463687 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.74□□□□□ -1.33
VPS8-216ENST00000463687 B3GNT8Q7Z7M8 397 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 ZSCAN30Q86W11 494 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 CDKL3Q8IVW4 592 aaPredicted RBP6.74□□□□□ -1.33
VPS8-216ENST00000463687 TBC1D3Q8IZP1 549 aaPredicted RBP6.74□□□□□ -1.33
VPS8-216ENST00000463687 SLC35F6Q8N357 371 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 DEFB119Q8N690 84 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 AGBL5Q8NDL9 886 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 ARRDC2Q8TBH0 407 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 WDR60Q8WVS4 1066 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 MAIP1Q8WWC4 291 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 DNASE2BQ8WZ79 361 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 CPT1BQ92523 772 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 ECHDC3Q96DC8 303 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 FAM122AQ96E09 287 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 PBKQ96KB5 322 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 AGAP3Q96P47 875 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 QKIQ96PU8 341 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS8-216ENST00000463687 SEMA3CQ99985 751 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 GORASP1Q9BQQ3 440 aa6.74□□□□□ -1.33
VPS8-216ENST00000463687 SLC25A51Q9H1U9 297 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms