RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 E5RI56 91 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 FXYD1O00168 92 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 E2F3O00716 465 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 PPP6CO00743 305 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 ANGPT2O15123 496 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 AHCYL1O43865 530 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 NIPSNAP2O75323 286 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 ATP6AP2O75787 350 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 RNASEH2AO75792 299 aaKnown RBP9.69□□□□□ -0.86
PTPRD-207ENST00000463477 HGFP14210 728 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 ZNF26P17031 533 aaPredicted RBP9.69□□□□□ -0.86
PTPRD-207ENST00000463477 ITPKAP23677 461 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 CDKN1CP49918 316 aaPredicted RBP9.69□□□□□ -0.86
PTPRD-207ENST00000463477 ERVK-8P63133 956 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 RCAN2Q14206 197 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 GRB7Q14451 532 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 SMU1Q2TAY7 513 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 CARD16Q5EG05 197 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 ZRANB3Q5FWF4 1079 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 WDR45BQ5MNZ6 344 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 ARMC12Q5T9G4 340 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 LCN8Q6JVE9 175 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 C22orf39Q6P5X5 142 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 FBXL19Q6PCT2 694 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 PRR23CQ6ZRP0 262 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 GPRIN3Q6ZVF9 776 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 CYP2U1Q7Z449 544 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 SYVN1Q86TM6 617 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 CACUL1Q86Y37 369 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 GALNT13Q8IUC8 556 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 DDIASQ8IXT1 998 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 CBARPQ8N350 705 aaPredicted RBP9.69□□□□□ -0.86
PTPRD-207ENST00000463477 HDDC3Q8N4P3 179 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 DEFB119Q8N690 84 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 RNF148Q8N7C7 305 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 PDPRQ8NCN5 879 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 PIGKQ92643 395 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 GBP5Q96PP8 586 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 SLC30A3Q99726 388 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 CENPKQ9BS16 269 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 HGH1Q9BTY7 390 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 APPL1Q9UKG1 709 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 SLC30A1Q9Y6M5 507 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 NUMA1Q14980 2115 aa9.69□□□□□ -0.86
PTPRD-207ENST00000463477 C15orf38-AP3S2A0A0A6YYH1 394 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 C10orf142B7Z368 130 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 C1QTNF3-AMACRE9PGA6 284 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 IFRD1O00458 451 aaPredicted RBP9.68□□□□□ -0.86
PTPRD-207ENST00000463477 NR5A2O00482 541 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 GIPC1O14908 333 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 SNX2O60749 519 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 EEDO75530 441 aaKnown RBP9.68□□□□□ -0.86
PTPRD-207ENST00000463477 CRCPO75575 148 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 SEMA4FO95754 770 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 PRNPP04156 253 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 CTSLP07711 333 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 PABPC4LP0CB38 370 aaKnown RBP9.68□□□□□ -0.86
PTPRD-207ENST00000463477 ZNF7P17097 686 aaPredicted RBP9.68□□□□□ -0.86
PTPRD-207ENST00000463477 CAPN3P20807 821 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 DRD3P35462 400 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 RECQLP46063 649 aaPredicted RBP9.68□□□□□ -0.86
PTPRD-207ENST00000463477 SLC7A2P52569 658 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 HK3P52790 923 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 TLR1Q15399 786 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 TGFBIQ15582 683 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 GPR33Q49SQ1 333 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 LIN52Q52LA3 116 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 IL23RQ5VWK5 629 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 SLC23A3Q6PIS1 610 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 DPY19L3Q6ZPD9 716 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 SNX20Q7Z614 316 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 ARPINQ7Z6K5 226 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 RABEPKQ7Z6M1 372 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 FAM124AQ86V42 546 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 DHFR2Q86XF0 187 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 PTRH1Q86Y79 214 aaKnown RBP9.68□□□□□ -0.86
PTPRD-207ENST00000463477 RBFAQ8N0V3 343 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 AADATQ8N5Z0 425 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 SIDT2Q8NBJ9 832 aaKnown RBP9.68□□□□□ -0.86
PTPRD-207ENST00000463477 OR2T34Q8NGX1 318 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 CEP76Q8TAP6 659 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 GANCQ8TET4 914 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 EEF1AKMT1Q8WVE0 214 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 ATP6V1E2Q96A05 226 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 SLCO4A1Q96BD0 722 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 LRIG1Q96JA1 1093 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 ZNF597Q96LX8 424 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 HSPA12BQ96MM6 686 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 KCNA7Q96RP8 456 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 LYSMD1Q96S90 227 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 HEPHQ9BQS7 1158 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 GPR63Q9BZJ6 419 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 ZNF696Q9H7X3 374 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 SEMA4BQ9NPR2 832 aaPredicted RBP9.68□□□□□ -0.86
PTPRD-207ENST00000463477 C8orf4Q9NR00 106 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 LATS2Q9NRM7 1088 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 ACTR3BQ9P1U1 418 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 KLHL42Q9P2K6 505 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 GALPQ9UBC7 116 aa9.68□□□□□ -0.86
PTPRD-207ENST00000463477 SERGEFQ9UGK8 458 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms