RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	RBP3	P10745	1247 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	FOXN2	P32314	431 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	SHMT2	P34897	504 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	COPS2	P61201	443 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	GRB7	Q14451	532 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	KYNU	Q16719	465 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	SLC5A12	Q1EHB4	618 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	AADACL2	Q6P093	401 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	KCNMB4	Q86W47	210 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	CCDC50	Q8IVM0	306 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	CDKL3	Q8IVW4	592 aa	Predicted RBP	10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	FAM20C	Q8IXL6	584 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	TBC1D21	Q8IYX1	336 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	GPR135	Q8IZ08	494 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	ZNF655	Q8N720	491 aa	Predicted RBP	10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	CLEC1A	Q8NC01	280 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	OR5K2	Q8NHB8	316 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	PTER	Q96BW5	349 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	CDKN2AIPNL	Q96HQ2	116 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	C5orf34	Q96MH7	638 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	ZNF285	Q96NJ3	590 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	AP1M1	Q9BXS5	423 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	ILKAP	Q9H0C8	392 aa	Predicted RBP	10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	VPS37B	Q9H9H4	285 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	SLC6A20	Q9NP91	592 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	OR6C2	Q9NZP2	312 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	IFT80	Q9P2H3	777 aa	Predicted RBP	10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	NOVA2	Q9UNW9	492 aa	Known RBP	10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	PCDHA3	Q9Y5H8	950 aa		10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	COPG1	Q9Y678	874 aa	Known RBP	10.74	□□□□□ -0.69
PTPN7-204	ENST00000462815	DIDO1	Q9BTC0	2240 aa	Known RBP	10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	RCCD1	A6NED2	376 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	OR51F1	A6NGY5	319 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	ALOX12B	O75342	701 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	IPO13	O94829	963 aa	Known RBP	10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	METTL18	O95568	372 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	IGHE	P01854	428 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	ALPP	P05187	535 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	TPM3	P06753	285 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	PRF1	P14222	555 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	PKLR	P30613	574 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	MAGEA1	P43355	309 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	EIF3E	P60228	445 aa	Known RBP	10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	CACNG1	Q06432	222 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815		Q0VFX4	171 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	ITIH4	Q14624	930 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	LYPLAL1	Q5VWZ2	237 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	TLDC1	Q6P9B6	456 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	NAPRT	Q6XQN6	538 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	TC2N	Q8N9U0	490 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	TTC13	Q8NBP0	860 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	OR13J1	Q8NGT2	312 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	PPP4R1	Q8TF05	950 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	ALG3	Q92685	438 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	FKBP10	Q96AY3	582 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	NACC2	Q96BF6	587 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	WDR77	Q9BQA1	342 aa	Predicted RBP	10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	MESP1	Q9BRJ9	268 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	OSBPL8	Q9BZF1	889 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	SLC7A5P2	Q9GIP4	190 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	SLC26A1	Q9H2B4	701 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	EURL	Q9NYK6	297 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	NDOR1	Q9UHB4	597 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	FBXL4	Q9UKA2	621 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	PLAGL1	Q9UM63	463 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	SRPK3	Q9UPE1	567 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	PLCL2	Q9UPR0	1127 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	ASF1A	Q9Y294	204 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	HS3ST3B1	Q9Y662	390 aa		10.73	□□□□□ -0.69
PTPN7-204	ENST00000462815	DOCK10	Q96BY6	2186 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	PEX12	O00623	359 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	CBFA2T2	O43439	604 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	MED26	O95402	600 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	AP2A1	O95782	977 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	CD63	P08962	238 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	TPH1	P17752	444 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	MAG	P20916	626 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	MMP11	P24347	488 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	TNFRSF8	P28908	595 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	NSG1	P42857	185 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	TSFM	P43897	325 aa	Known RBP	10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	AIMP2	Q13155	320 aa	Known RBP	10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	PRPSAP1	Q14558	356 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	KIR2DS3	Q14952	304 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	NKG7	Q16617	165 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	HIF1A	Q16665	826 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	PRAMEF13	Q5VWM6	474 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	FCRL6	Q6DN72	434 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	KIRREL2	Q6UWL6	708 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	OVCH1	Q7RTY7	1134 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	VRK3	Q8IV63	474 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	CNGA4	Q8IV77	575 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	SRRM1	Q8IYB3	904 aa	Known RBP	10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	ZADH2	Q8N4Q0	377 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	DTWD1	Q8N5C7	304 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	LMNTD1	Q8N9Z9	388 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	LKAAEAR1	Q8TD35	194 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	STYX	Q8WUJ0	223 aa		10.72	□□□□□ -0.69
PTPN7-204	ENST00000462815	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	10.72	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms